FFCP PHASE1:Hg19::chr1:55266926..55266958,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:55266926..55266958,-
|short_description=p2@TTC22
|description=CAGE_peak_2_at_TTC22_5end
|association_with_transcript=0bp_to_ENST00000371276,NM_001114108,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55001 | |EntrezGene=55001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |HGNC=26067 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAA0 | |UniProt=Q5TAA0 | ||
|association_with_transcript=0bp_to_ENST00000371276,NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | |||
|cluster_id=chr1:55266926..55266958,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_TTC22_5end | |||
|id=chr1:55266926..55266958,- | |||
|ontology_enrichment_celltype=CL:0002076!4.28e-12!43;CL:0002251!3.56e-10!21;CL:0000791!8.88e-09!18;CL:0000789!8.88e-09!18;CL:0002420!8.88e-09!18;CL:0002419!8.88e-09!18;CL:0000790!8.88e-09!18;CL:0000223!5.25e-08!59;CL:0000625!8.89e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.37e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.43e-14!169;UBERON:0000925!4.43e-14!169;UBERON:0006595!4.43e-14!169;UBERON:0001007!8.39e-11!155;UBERON:0001555!8.39e-11!155;UBERON:0007026!8.39e-11!155;UBERON:0000166!3.23e-09!21;UBERON:0004921!7.20e-09!129;UBERON:0004185!7.20e-09!129;UBERON:0007023!9.17e-09!115;UBERON:0000161!3.36e-08!35;UBERON:0001004!2.10e-07!72;UBERON:0000077!3.18e-07!130;UBERON:0000974!8.37e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.49e-17;33!UBERON:0001041;3.16e-10;14!UBERON:0005409;2.70e-09;22!UBERON:0001555;6.96e-09;54!UBERON:0000160;1.38e-07;17!UBERON:0006562;1.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.23e-10,118;UBERON:0004119,7.05e-10,160;UBERON:0000925,7.05e-10,160;UBERON:0006595,7.05e-10,160;UBERON:0001007,7.29e-09,145;UBERON:0001555,7.29e-09,145;UBERON:0007026,7.29e-09,145;UBERON:0005409,2.72e-08,25;UBERON:0000160,8.19e-08,17;UBERON:0001041,2.06e-07,87 | |||
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| ||
|short_description=p2@TTC22 | |||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p2@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC22_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000371276, NM_001114108, NM_017904, uc001cxz.3, uc009vzt.1_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | Q5TAA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.23e-10 | 118 |
endoderm-derived structure | 7.05e-10 | 160 |
endoderm | 7.05e-10 | 160 |
presumptive endoderm | 7.05e-10 | 160 |
digestive system | 7.29e-09 | 145 |
digestive tract | 7.29e-09 | 145 |
primitive gut | 7.29e-09 | 145 |
gastrointestinal system | 2.72e-08 | 25 |
intestine | 8.19e-08 | 17 |
foregut | 2.06e-07 | 87 |