FFCP PHASE1:Hg19::chr2:85628754..85628782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=822 | |EntrezGene=822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |HGNC=1474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000483659_5end | |association_with_transcript=11bp_to_ENST00000483659_5end | ||
|cluster_id=chr2:85628754..85628782,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_8_at_CAPG_5end | |description=CAGE_peak_8_at_CAPG_5end | ||
|id=chr2:85628754..85628782,- | |id=chr2:85628754..85628782,- | ||
|ontology_enrichment_celltype=CL:0000144!6.20e-09!625;CL:0002371!8.54e-09!591;CL:0000557!2.28e-08!71;CL:0000548!6.18e-08!679;CL:0000004!6.18e-08!679;CL:0000255!6.18e-08!679;CL:0000012!1.40e-07!682;CL:0000839!2.89e-07!70;CL:0000063!2.89e-07!578;CL:0000003!4.06e-07!722;CL:0002009!4.31e-07!65 | |ontology_enrichment_celltype=CL:0000144!6.20e-09!625;CL:0002371!8.54e-09!591;CL:0000557!2.28e-08!71;CL:0000548!6.18e-08!679;CL:0000004!6.18e-08!679;CL:0000255!6.18e-08!679;CL:0000012!1.40e-07!682;CL:0000839!2.89e-07!70;CL:0000063!2.89e-07!578;CL:0000003!4.06e-07!722;CL:0002009!4.31e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.32e-26;6!CL:0002202;6.34e-08;9!CL:0002632;6.34e-08;9!CL:0002328;9.20e-07;3!CL:0000307;9.20e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.40e-26,6;CL:0002202,6.04e-08,9;CL:0002632,6.04e-08,9;CL:0000557,1.57e-07,67;CL:0002009,3.40e-07,61;CL:0002328,8.49e-07,3;CL:0000068,9.24e-07,3;CL:0000069,9.24e-07,3;CL:0000307,9.24e-07,3;CL:0000377,9.24e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.20e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.83e-07!80;UBERON:0004765!9.09e-07!101;UBERON:0001434!9.09e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!1.83e-07!80;UBERON:0004765!9.09e-07!101;UBERON:0001434!9.09e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;7.01e-09;2!UBERON:0002185;3.56e-08;5!UBERON:0007196;6.72e-07;15!UBERON:0001558;6.72e-07;15!UBERON:0004815;9.20e-07;3!UBERON:0002031;9.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.99e-09,2;UBERON:0002185,3.76e-08,5;UBERON:0007196,6.92e-07,15;UBERON:0001558,6.92e-07,15;UBERON:0004765,7.77e-07,90;UBERON:0004815,8.49e-07,3;UBERON:0002031,8.49e-07,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,1.74467704820074,0,0,0,0,1.39560233594486,0.436882744260345,0.791300934685361,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,1.42800483870977,0.313454721478088,0,0.273748850145768,0,0.152826811495903,0.0821005894499457,0,0,0,0,2.75826367343678,0.6024118375565,4.43704812200145,0.0774672005803016,0,0,0,0.401088894940283,0,1.79132379391939,0.971680998056939,0.515151135268373,0,0,1.21292030593908,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0.689491361473237,0,0,0.188242339542605,0,0.224723484445085,1.22433556948361,0,0,1.31940520074686,0.398927315243264,0,0.870627715885752,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0.422510572623884,0.425208599930087,0.209658645508376,0.336985893439485,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.453237370790265,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.30361867064741,0,0,0,0.665188192387692,0.087834785693126,0,0,1.11235332835329,0.649094787309367,0.348259474598534,3.32394901297163,0,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0,0.485618833104395,0.421352420106746,0.204154171254893,1.59684612505298,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,1.92972281457866,0,0,3.60939740834793,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0.370353780634118,0,0,1.44331342025273,0.34779121492523,0,0,0,0,0,0.858486162094873,2.70838706696137,1.8720341211139,7.13429578985896,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,1.47798971368783,0.176096868026452,0.207328115540772,0.432359860250884,0.88369703398466,0,0,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,6.08118903205952,6.52934218861764,12.6500363689819,0,2.29723871668228,0,0.144781306667579,0.410952645100767,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,1.54657762555539,0,0,0,0,0,0,1.00034104211935,1.89885516589815,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0.213455115606889,0,0,1.5119514666484,0,0,0.561320188866147,0.128139149255701,0,0,1.48418066444991,0.616838775210622,0,0,0,0.348631135379878,0.120859449591622,0.40101294060657,0.276242966807689,0,0,0.262248829918848,0,0.308061348417659,0,1.46139224653261,0,1.13733384070897,0,0.431831832204279,0,0,1.50506932156456,0,3.3243040357149,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.462145851343933,0.921022048356777,0.827019434907183,0.107420244868274,0.580066775656914,0.255679882248303,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,1.28381696410176,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0.633322905892992,0,0,0,0,2.68120910214315,4.3556393944529,0,0.43050537267123,0,2.21715076768338,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0.318852545457645,0.399158742865633,0.766021480529467,0.635020748171649,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0.284136146806413,0.71623345421307,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,2.04386596391473,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.146178634172371,0.164230914106418,0.193978032976839,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| ||
|short_description=p8@CAPG | |short_description=p8@CAPG | ||
}} | }} |
Latest revision as of 16:09, 18 September 2015
Short description: | p8@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAPG_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 11bp_to_ENST00000483659_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.40e-26 | 6 |
epithelial cell of tracheobronchial tree | 6.04e-08 | 9 |
epithelial cell of lower respiratory tract | 6.04e-08 | 9 |
granulocyte monocyte progenitor cell | 1.57e-07 | 67 |
macrophage dendritic cell progenitor | 3.40e-07 | 61 |
bronchial epithelial cell | 8.49e-07 | 3 |
duct epithelial cell | 9.24e-07 | 3 |
branched duct epithelial cell | 9.24e-07 | 3 |
tracheal epithelial cell | 9.24e-07 | 3 |
tracheoblast | 9.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.99e-09 | 2 |
bronchus | 3.76e-08 | 5 |
tracheobronchial tree | 6.92e-07 | 15 |
lower respiratory tract | 6.92e-07 | 15 |
skeletal element | 7.77e-07 | 90 |
lower respiratory tract epithelium | 8.49e-07 | 3 |
epithelium of bronchus | 8.49e-07 | 3 |