FFCP PHASE1:Hg19::chr12:49717021..49717079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=10024 | |EntrezGene=10024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=12327 | |HGNC=12327 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q12815,Q6PJU7,F8VR46,F8VVT5,F8VSF9,F8VXV6,F8VVS4,F8VXF3,B7Z5Q9,F8W130 | |UniProt=Q12815,Q6PJU7,F8VR46,F8VVT5,F8VSF9,F8VXV6,F8VVS4,F8VXF3,B7Z5Q9,F8W130 | ||
|association_with_transcript=0bp_to_ENST00000257909,ENST00000380327,ENST00000546735,ENST00000546776,ENST00000548311,ENST00000549534,ENST00000549891,ENST00000550346,ENST00000550709,ENST00000551192,ENST00000551245_5end | |association_with_transcript=0bp_to_ENST00000257909,ENST00000380327,ENST00000546735,ENST00000546776,ENST00000548311,ENST00000549534,ENST00000549891,ENST00000550346,ENST00000550709,ENST00000551192,ENST00000551245_5end | ||
|cluster_id=chr12:49717021..49717079,+ | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_TROAP_5end | |description=CAGE_peak_1_at_TROAP_5end |
Latest revision as of 16:16, 18 September 2015
Short description: | p1@TROAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TROAP_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000257909, ENST00000380327, ENST00000546735, ENST00000546776, ENST00000548311, ENST00000549534, ENST00000549891, ENST00000550346, ENST00000550709, ENST00000551192, ENST00000551245_5end |
EntrezGene: | TROAP |
HGNC: | 12327 |
UniProt: | Q12815Q6PJU7F8VR46F8VVT5F8VSF9F8VXV6F8VVS4F8VXF3B7Z5Q9F8W130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TROAP |
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0
25
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75
100
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150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.03e-26 | 253 |
embryonic cell | 7.02e-11 | 250 |
squamous epithelial cell | 4.58e-07 | 63 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
cancer | 3.44e-55 | 235 |
disease of cellular proliferation | 1.38e-53 | 239 |
cell type cancer | 5.98e-30 | 143 |
organ system cancer | 1.12e-24 | 137 |
carcinoma | 3.64e-24 | 106 |
hematologic cancer | 1.51e-18 | 51 |
immune system cancer | 1.51e-18 | 51 |
leukemia | 1.25e-14 | 39 |
myeloid leukemia | 4.47e-11 | 31 |
adenocarcinoma | 9.04e-07 | 25 |
Showing 1 to 10 of 10 entries