FFCP PHASE1:Hg19::chr6:39290407..39290416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83795 | |EntrezGene=83795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14464 | |HGNC=14464 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000437525_5end | |association_with_transcript=-43bp_to_ENST00000437525_5end | ||
|cluster_id=chr6:39290407..39290416,- | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_5_at_KCNK16_5end | |description=CAGE_peak_5_at_KCNK16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!4.32e-26!2 | |ontology_enrichment_celltype=CL:0002535!4.32e-26!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4362!2.66e-11!5 | |ontology_enrichment_disease=DOID:4362!2.66e-11!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | |ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0006955!4.32e-26!2;UBERON:0004801!4.32e-26!2;UBERON:0002114!2.84e-16!12;UBERON:0002108!2.94e-14!14;UBERON:0002046!3.60e-11!5;UBERON:0004117!3.60e-11!5;UBERON:0007689!3.60e-11!5;UBERON:0007123!3.60e-11!5;UBERON:0003091!3.60e-11!5;UBERON:0000002!1.22e-09!6;UBERON:0001560!1.22e-09!6;UBERON:0000160!3.92e-08!27 | |ontology_enrichment_uberon=UBERON:0006955!4.32e-26!2;UBERON:0004801!4.32e-26!2;UBERON:0002114!2.84e-16!12;UBERON:0002108!2.94e-14!14;UBERON:0002046!3.60e-11!5;UBERON:0004117!3.60e-11!5;UBERON:0007689!3.60e-11!5;UBERON:0007123!3.60e-11!5;UBERON:0003091!3.60e-11!5;UBERON:0000002!1.22e-09!6;UBERON:0001560!1.22e-09!6;UBERON:0000160!3.92e-08!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0002114;5.96e-34;2!UBERON:0002108;5.15e-21;4!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18!UBERON:0000160;7.60e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0002114;5.96e-34;2!UBERON:0002108;5.15e-21;4!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18!UBERON:0000160;7.60e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0002114,5.96e-34,2;UBERON:0002108,5.15e-21,4;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0000160,7.60e-07,17 | |||
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|short_description=p5@KCNK16 | |short_description=p5@KCNK16 | ||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p5@KCNK16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNK16_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -43bp_to_ENST00000437525_5end |
EntrezGene: | KCNK16 |
HGNC: | 14464 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
duodenum | 5.96e-34 | 2 |
small intestine | 5.15e-21 | 4 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |