FFCP PHASE1:Hg19::chr19:45848386..45848393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147700 | |EntrezGene=147700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20717 | |HGNC=20717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-264bp_to_ENST00000470402,uc002pbg.1_5end | |association_with_transcript=-264bp_to_ENST00000470402,uc002pbg.1_5end | ||
|cluster_id=chr19:45848386..45848393,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_6_at_KLC3_5end | |description=CAGE_peak_6_at_KLC3_5end | ||
|id=chr19:45848386..45848393,+ | |id=chr19:45848386..45848393,+ | ||
|ontology_enrichment_celltype=CL:0001014!1.36e-12!2;CL:0001016!1.36e-12!2;CL:0002537!1.83e-11!5;CL:0000349!3.69e-09!3;CL:0002577!3.69e-09!3;CL:0002621!1.68e-08!3 | |ontology_enrichment_celltype=CL:0001014!1.36e-12!2;CL:0001016!1.36e-12!2;CL:0002537!1.83e-11!5;CL:0000349!3.69e-09!3;CL:0002577!3.69e-09!3;CL:0002621!1.68e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;4.89e-53;3!CL:0000349;7.67e-34;19!CL:0002537;1.05e-32;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.75e-53,3;CL:0000349,7.04e-34,19;CL:0002537,1.05e-32,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.65e-20!14;UBERON:0000158!2.65e-20!14;UBERON:0001723!3.16e-18!3;UBERON:0001033!3.16e-18!3;UBERON:0010056!3.16e-18!3;UBERON:0000305!6.20e-14!7;UBERON:0000166!1.56e-12!21;UBERON:0004871!3.31e-12!8;UBERON:0000161!1.04e-11!35;UBERON:0000478!1.85e-11!24;UBERON:0001042!2.25e-09!10;UBERON:0009145!2.25e-09!10;UBERON:0000165!3.50e-09!28;UBERON:0000930!3.50e-09!28;UBERON:0004923!1.56e-08!57;UBERON:0006562!1.57e-08!11;UBERON:0001949!1.68e-08!3;UBERON:0003124!2.07e-08!7;UBERON:0007029!1.98e-07!1;UBERON:0001557!2.56e-07!19;UBERON:0000989!3.40e-07!1;UBERON:0008811!3.40e-07!1;UBERON:0006258!3.40e-07!1;UBERON:0005876!3.40e-07!1;UBERON:0004874!3.40e-07!1;UBERON:0001987!4.58e-07!4;UBERON:0004340!4.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.05e-40;4!UBERON:0000478;5.55e-27;24!UBERON:0000305;1.02e-23;7!UBERON:0005631;5.90e-17;10!UBERON:0000158;5.90e-17;10!UBERON:0001723;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0000077;7.45e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-45,14;UBERON:0000158,1.25e-45,14;UBERON:0001987,3.31e-40,4;UBERON:0004340,3.31e-40,4;UBERON:0000478,5.19e-27,24;UBERON:0000305,1.02e-23,7;UBERON:0003124,1.61e-23,7;UBERON:0004871,6.64e-21,8;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0004923,2.65e-10,66;UBERON:0000995,1.48e-08,21;UBERON:0005795,3.27e-08,22;UBERON:0003975,3.27e-08,22;UBERON:0004175,2.43e-07,25 | |||
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|short_description=p6@KLC3 | |short_description=p6@KLC3 | ||
}} | }} |
Latest revision as of 16:57, 18 September 2015
Short description: | p6@KLC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLC3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -264bp_to_ENST00000470402, uc002pbg.1_5end |
EntrezGene: | KLC3 |
HGNC: | 20717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.75e-53 | 3 |
extraembryonic cell | 7.04e-34 | 19 |
amnion mesenchymal stem cell | 1.05e-32 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-45 | 14 |
membranous layer | 1.25e-45 | 14 |
placenta | 3.31e-40 | 4 |
allantois | 3.31e-40 | 4 |
extraembryonic structure | 5.19e-27 | 24 |
amnion | 1.02e-23 | 7 |
chorion | 1.61e-23 | 7 |
somatic layer of lateral plate mesoderm | 6.64e-21 | 8 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
organ component layer | 2.65e-10 | 66 |
uterus | 1.48e-08 | 21 |
embryonic uterus | 3.27e-08 | 22 |
internal female genitalia | 3.27e-08 | 22 |
internal genitalia | 2.43e-07 | 25 |