FFCP PHASE1:Hg19::chr21:45345277..45345281,+: Difference between revisions
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|id=chr21:45345277..45345281,+
|short_description=p4@AGPAT3
|description=CAGE_peak_4_at_AGPAT3_5end
|association_with_transcript=0bp_to_ENST00000438598,NM_001037553...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56894 | |EntrezGene=56894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=326 | |HGNC=326 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPU6,Q9NRZ7 | |UniProt=E7EPU6,Q9NRZ7 | ||
|association_with_transcript=0bp_to_ENST00000438598,NM_001037553,uc002zdw.2_5end | |||
|cluster_id=chr21:45345277..45345281,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_4_at_AGPAT3_5end | |||
|id=chr21:45345277..45345281,+ | |||
|ontology_enrichment_celltype=CL:1000507!6.74e-11!12;CL:1000494!6.74e-11!12;CL:1000449!1.09e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.16e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.63e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-18!115;UBERON:0003103!1.07e-12!69;UBERON:0009773!6.74e-11!12;UBERON:0001231!6.74e-11!12;UBERON:0004810!6.74e-11!12;UBERON:0000489!1.13e-10!32;UBERON:0004876!5.78e-09!20;UBERON:0006555!6.06e-09!17;UBERON:0005103!6.06e-09!17;UBERON:0000083!6.06e-09!17;UBERON:0009201!6.06e-09!17;UBERON:0004819!6.06e-09!17;UBERON:0006553!6.06e-09!17;UBERON:0003074!6.06e-09!17;UBERON:0003060!6.06e-09!17;UBERON:0002113!1.02e-08!27;UBERON:0003918!1.02e-08!27;UBERON:0005095!1.02e-08!27;UBERON:0007687!1.02e-08!27;UBERON:0000080!2.54e-08!18;UBERON:0002120!2.54e-08!18;UBERON:0004875!2.54e-08!18;UBERON:0005721!2.54e-08!18;UBERON:0005754!2.54e-08!18;UBERON:0007297!2.54e-08!18;UBERON:0003887!4.12e-08!21;UBERON:0006554!9.85e-08!44;UBERON:0004211!1.09e-07!16;UBERON:0001285!1.09e-07!16;UBERON:0007684!1.09e-07!16;UBERON:0003220!1.09e-07!16;UBERON:0004208!1.09e-07!16;UBERON:0001008!1.81e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;3.21e-11;2!UBERON:0001630;3.21e-11;2!UBERON:0001829;3.92e-11;2!UBERON:0004921;1.29e-08;33!UBERON:0001044;3.70e-08;6!UBERON:0003293;3.70e-08;6!UBERON:0003294;3.70e-08;6!UBERON:0010047;3.70e-08;6!UBERON:0003408;3.70e-08;6!UBERON:0000167;3.70e-08;6!UBERON:0000165;1.37e-07;28!UBERON:0001723;1.89e-07;3!UBERON:0001033;1.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,3.30e-11,2;UBERON:0001630,3.30e-11,2;UBERON:0001829,4.02e-11,2;UBERON:0000166,6.12e-10,22;UBERON:0001044,3.70e-08,6;UBERON:0003293,3.70e-08,6;UBERON:0003294,3.70e-08,6;UBERON:0010047,3.70e-08,6;UBERON:0000167,3.70e-08,6;UBERON:0001723,1.80e-07,3;UBERON:0001033,1.80e-07,3;UBERON:0010056,1.80e-07,3;UBERON:0000165,2.63e-07,29;UBERON:0000930,2.63e-07,29;UBERON:0007023,3.40e-07,114 | |||
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| ||
|short_description=p4@AGPAT3 | |||
}} | }} |
Latest revision as of 17:29, 18 September 2015
Short description: | p4@AGPAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGPAT3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000438598, NM_001037553, uc002zdw.2_5end |
EntrezGene: | AGPAT3 |
HGNC: | 326 |
UniProt: | E7EPU6Q9NRZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 3.30e-11 | 2 |
muscle organ | 3.30e-11 | 2 |
major salivary gland | 4.02e-11 | 2 |
oral opening | 6.12e-10 | 22 |
saliva-secreting gland | 3.70e-08 | 6 |
gland of oral region | 3.70e-08 | 6 |
gland of foregut | 3.70e-08 | 6 |
oral gland | 3.70e-08 | 6 |
oral cavity | 3.70e-08 | 6 |
tongue | 1.80e-07 | 3 |
gustatory system | 1.80e-07 | 3 |
future tongue | 1.80e-07 | 3 |
mouth | 2.63e-07 | 29 |
stomodeum | 2.63e-07 | 29 |
adult organism | 3.40e-07 | 114 |