FFCP PHASE1:Hg19::chr3:49978342..49978346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10180 | |EntrezGene=10180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9903 | |HGNC=9903 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=224bp_to_ENST00000488807_5end | |association_with_transcript=224bp_to_ENST00000488807_5end | ||
|cluster_id=chr3:49978342..49978346,+ | |||
|description=CAGE_peak_7_at_RBM6_5end | |description=CAGE_peak_7_at_RBM6_5end | ||
|id=chr3:49978342..49978346,+ | |id=chr3:49978342..49978346,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.00e-17!140;CL:0002031!4.06e-16!124;CL:0002087!7.67e-15!119;CL:0000037!9.64e-13!172;CL:0000566!9.64e-13!172;CL:0000988!3.24e-11!182;CL:0002032!4.56e-11!165;CL:0000837!4.56e-11!165;CL:0000542!2.89e-09!53;CL:0000051!2.89e-09!53;CL:0000838!3.10e-09!52;CL:0000945!1.25e-08!24;CL:0000826!1.25e-08!24;CL:0000839!4.92e-08!70;CL:0000557!6.31e-07!71 | |ontology_enrichment_celltype=CL:0000738!3.00e-17!140;CL:0002031!4.06e-16!124;CL:0002087!7.67e-15!119;CL:0000037!9.64e-13!172;CL:0000566!9.64e-13!172;CL:0000988!3.24e-11!182;CL:0002032!4.56e-11!165;CL:0000837!4.56e-11!165;CL:0000542!2.89e-09!53;CL:0000051!2.89e-09!53;CL:0000838!3.10e-09!52;CL:0000945!1.25e-08!24;CL:0000826!1.25e-08!24;CL:0000839!4.92e-08!70;CL:0000557!6.31e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.16e-13;13!CL:0000542;2.00e-11;53!CL:0000945;1.53e-09;24!CL:0000623;1.12e-07;3!CL:0000791;8.35e-07;18!CL:0000789;8.35e-07;18!CL:0002419;8.35e-07;18 | |ontology_enrichment_celltype_v019=CL:0000236;1.16e-13;13!CL:0000542;2.00e-11;53!CL:0000945;1.53e-09;24!CL:0000623;1.12e-07;3!CL:0000791;8.35e-07;18!CL:0000789;8.35e-07;18!CL:0002419;8.35e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.69e-16,52;CL:0000542,6.24e-16,53;CL:0000051,6.24e-16,53;CL:0000236,6.00e-13,14;CL:0000945,9.67e-10,24;CL:0000826,9.67e-10,24;CL:0000738,4.05e-08,136;CL:0000623,5.93e-08,3;CL:0000825,5.93e-08,3;CL:0002087,8.17e-08,115;CL:0002031,2.35e-07,120;CL:0000791,9.20e-07,18;CL:0000789,9.20e-07,18;CL:0002420,9.20e-07,18;CL:0002419,9.20e-07,18;CL:0000790,9.20e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.00e-11;53!CL:0000790;8.35e-07;18 | |ontology_enrichment_development_v019=CL:0000051;2.00e-11;53!CL:0000790;8.35e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.39e-09!57;UBERON:0005068!1.39e-09!57;UBERON:0006241!1.39e-09!57;UBERON:0007135!1.39e-09!57;UBERON:0000073!3.01e-08!94;UBERON:0001016!3.01e-08!94;UBERON:0001017!3.12e-08!82;UBERON:0002780!5.14e-08!41;UBERON:0001890!5.14e-08!41;UBERON:0006240!5.14e-08!41;UBERON:0001893!7.65e-08!34;UBERON:0005743!7.76e-08!86;UBERON:0000955!8.01e-08!69;UBERON:0006238!8.01e-08!69;UBERON:0002616!9.13e-08!59;UBERON:0002791!1.49e-07!33;UBERON:0003080!1.51e-07!42;UBERON:0007023!1.86e-07!115;UBERON:0002020!3.52e-07!34;UBERON:0003528!3.52e-07!34;UBERON:0001869!4.18e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!1.39e-09!57;UBERON:0005068!1.39e-09!57;UBERON:0006241!1.39e-09!57;UBERON:0007135!1.39e-09!57;UBERON:0000073!3.01e-08!94;UBERON:0001016!3.01e-08!94;UBERON:0001017!3.12e-08!82;UBERON:0002780!5.14e-08!41;UBERON:0001890!5.14e-08!41;UBERON:0006240!5.14e-08!41;UBERON:0001893!7.65e-08!34;UBERON:0005743!7.76e-08!86;UBERON:0000955!8.01e-08!69;UBERON:0006238!8.01e-08!69;UBERON:0002616!9.13e-08!59;UBERON:0002791!1.49e-07!33;UBERON:0003080!1.51e-07!42;UBERON:0007023!1.86e-07!115;UBERON:0002020!3.52e-07!34;UBERON:0003528!3.52e-07!34;UBERON:0001869!4.18e-07!32 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.458480434487708,0.246301768349837,0.314843125254717,0,0.383829398097213,0.154816123316076,0,0,0.739508020333575,0.697204805222715,0.853015394924529,0,1.66198622559563,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0.515151135268373,0.726991193897824,0.377875943688809,0.970336244751265,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,1.35426486594342,0,0.545812300115692,0.449446968890169,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0.786300418025466,0.600707571366025,0,0.855038231223746,0.39783335439818,0.547992461293902,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,1.72425731986345,0,1.90810750907073,1.70763890732835,1.17447437874188,3.05818582500183,1.32171328579026,1.12101712596307,1.05353633910031,0.590129310341499,0.393010762749165,1.02800749499755,0.334372990781356,0.651844533267181,0.946895611469467,0,0.111410456885174,0.589211814949674,1.10766947291811,0,0.128091319725675,0,0.822189523018381,0.276350017785848,0,0.593146252648242,0.535081656179426,0,0.226618685395132,1.14966148080576,0,0.253019692019503,0,0,0,0.301150238155546,0,1.24930726552346,0,0,0,1.33720097891754,1.88271725047639,0,0,0,0,1.00267582127178,0,0,0,0.189069634328136,0.665188192387692,0.087834785693126,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.715471872916026,0.571994910780128,1.48583000531826,0.198762407366705,0,0.347140501607594,0,0,0,0.626984899610432,0,1.06729878806013,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0.561803226808994,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0.300091096084402,0.103052529238439,1.03056216018252,0.18611685633159,0,0,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,1.32438929824395,0.368965315629341,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0.829312462163088,0.432359860250884,0.88369703398466,0.063497894292169,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0.788123040807709,1.50939302401662,1.54011643535698,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0,0.271265023699736,0,0.356857977594324,0,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.686286847621712,0.82707210449155,0.431428401637234,0.320182673410333,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0,0.247528499761764,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0,0,0.165284915360978,0.384380134730212,0.893288987462089,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0,0.684704037099577,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.334330152832435,0.568272293612826,0.23874448473769,0.296964680832639,0,0.994147647766298,0.703347082052564,0,0.16480387422676,1.05562704063997,0.19924798825107,0.276283915531148,0.503865495708552,0.20453736500431,0.738508832766417,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.649376687132959,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.689486746482929,0,0,0.885741385813839,0.844175070377856,0,1.87984741883082,0.295547618953547,0,0.10893846351899,0.278847488557207,0,0,0.46112780877612,0.359030577639089,0.325942115766024,0.31900115973192,0.274792780205587,0,0,0,0,0.225595660617181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| ||
|short_description=p7@RBM6 | |short_description=p7@RBM6 | ||
}} | }} |
Latest revision as of 17:51, 18 September 2015
Short description: | p7@RBM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RBM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 224bp_to_ENST00000488807_5end |
EntrezGene: | RBM6 |
HGNC: | 9903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.69e-16 | 52 |
lymphocyte | 6.24e-16 | 53 |
common lymphoid progenitor | 6.24e-16 | 53 |
B cell | 6.00e-13 | 14 |
lymphocyte of B lineage | 9.67e-10 | 24 |
pro-B cell | 9.67e-10 | 24 |
leukocyte | 4.05e-08 | 136 |
natural killer cell | 5.93e-08 | 3 |
pro-NK cell | 5.93e-08 | 3 |
nongranular leukocyte | 8.17e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.35e-07 | 120 |
mature alpha-beta T cell | 9.20e-07 | 18 |
alpha-beta T cell | 9.20e-07 | 18 |
immature T cell | 9.20e-07 | 18 |
mature T cell | 9.20e-07 | 18 |
immature alpha-beta T cell | 9.20e-07 | 18 |