FFCP PHASE1:Hg19::chr11:62186498..62186515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7356 | |EntrezGene=7356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12523 | |HGNC=12523 | ||
|TSSclassifier=strong | |||
|UniProt=P11684 | |UniProt=P11684 | ||
|association_with_transcript=0bp_to_ENST00000278282,NM_003357_5end | |association_with_transcript=0bp_to_ENST00000278282,NM_003357_5end | ||
|cluster_id=chr11:62186498..62186515,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_1_at_SCGB1A1_5end | |description=CAGE_peak_1_at_SCGB1A1_5end | ||
|id=chr11:62186498..62186515,+ | |id=chr11:62186498..62186515,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;2.94e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.05e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-14!115;UBERON:0000065!4.94e-09!53;UBERON:0004119!1.39e-08!169;UBERON:0000925!1.39e-08!169;UBERON:0006595!1.39e-08!169;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0001004!1.88e-08!72;UBERON:0005177!3.87e-08!107;UBERON:0000077!2.66e-07!130;UBERON:0004921!2.83e-07!129;UBERON:0004185!2.83e-07!129;UBERON:0005178!6.50e-07!34;UBERON:0002224!6.50e-07!34;UBERON:0001041!7.00e-07!98;UBERON:0000464!9.66e-07!104 | |ontology_enrichment_uberon=UBERON:0007023!3.01e-14!115;UBERON:0000065!4.94e-09!53;UBERON:0004119!1.39e-08!169;UBERON:0000925!1.39e-08!169;UBERON:0006595!1.39e-08!169;UBERON:0001007!1.83e-08!155;UBERON:0001555!1.83e-08!155;UBERON:0007026!1.83e-08!155;UBERON:0001004!1.88e-08!72;UBERON:0005177!3.87e-08!107;UBERON:0000077!2.66e-07!130;UBERON:0004921!2.83e-07!129;UBERON:0004185!2.83e-07!129;UBERON:0005178!6.50e-07!34;UBERON:0002224!6.50e-07!34;UBERON:0001041!7.00e-07!98;UBERON:0000464!9.66e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.20e-10;6!UBERON:0003127;2.20e-09;2!UBERON:0000341;2.92e-09;2!UBERON:0006562;5.10e-09;2!UBERON:0002370;2.64e-08;2!UBERON:0005058;2.64e-08;2!UBERON:0009113;2.64e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,2.47e-13,10;UBERON:0006562,6.74e-12,11;UBERON:0003127,2.20e-09,2;UBERON:0000341,2.92e-09,2;UBERON:0001042,3.30e-09,10;UBERON:0009145,3.30e-09,10;UBERON:0001004,3.66e-07,74;UBERON:0007023,7.34e-07,114 | |||
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| ||
|short_description=p1@SCGB1A1 | |short_description=p1@SCGB1A1 | ||
}} | }} |
Latest revision as of 18:53, 18 September 2015
Short description: | p1@SCGB1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCGB1A1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000278282, NM_003357_5end |
EntrezGene: | SCGB1A1 |
HGNC: | 12523 |
UniProt: | P11684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neck | 2.47e-13 | 10 |
pharynx | 6.74e-12 | 11 |
open tracheal system trachea | 2.20e-09 | 2 |
throat | 2.92e-09 | 2 |
chordate pharynx | 3.30e-09 | 10 |
pharyngeal region of foregut | 3.30e-09 | 10 |
respiratory system | 3.66e-07 | 74 |
adult organism | 7.34e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.05e-12 | 14 |