FFCP PHASE1:Hg19::chr1:174846503..174846514,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_uc001gkh.3_5end | |association_with_transcript=-15bp_to_uc001gkh.3_5end | ||
|cluster_id=chr1:174846503..174846514,+ | |||
|coexpression_cluster_id=C3906 | |coexpression_cluster_id=C3906 | ||
|description=CAGE_peak_39_at_RABGAP1L_5end | |description=CAGE_peak_39_at_RABGAP1L_5end | ||
|id=chr1:174846503..174846514,+ | |id=chr1:174846503..174846514,+ | ||
|ontology_enrichment_celltype=CL:0000785!9.12e-08!2;CL:0000955!9.12e-08!2;CL:0000818!9.12e-08!2;CL:0000954!9.12e-08!2;CL:0000816!9.12e-08!2 | |ontology_enrichment_celltype=CL:0000785!9.12e-08!2;CL:0000955!9.12e-08!2;CL:0000818!9.12e-08!2;CL:0000954!9.12e-08!2;CL:0000816!9.12e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000785;8.64e-30;1!CL:0000819;8.64e-30;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.99e-30,1;CL:0000785,1.33e-15,2;CL:0000955,1.33e-15,2;CL:0000818,1.33e-15,2;CL:0000954,1.33e-15,2;CL:0000816,1.33e-15,2;CL:0000817,7.42e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.24e-15;2 | |||
|ontology_enrichment_disease=DOID:1036!1.67e-10!8;DOID:8692!1.68e-07!31;DOID:1240!5.31e-07!39 | |ontology_enrichment_disease=DOID:1036!1.67e-10!8;DOID:8692!1.68e-07!31;DOID:1240!5.31e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060073;8.64e-30;1!DOID:8675;8.64e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.99e-30,1;DOID:8675,9.99e-30,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,3.7879555340959,0,0.664601683750863,0.270803863765016,2.30564375506215,1.95089021339817,0.164437904603676,0,0,0,0,0,0.679856056185397,0.766440987203842,1.03088233644789,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,0.902382642468723,0.784250137270958,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,3.7879555340959,0,0.664601683750863,0.270803863765016,2.30564375506215,1.95089021339817,0.164437904603676,0,0,0,0,0,0.679856056185397,0.766440987203842,1.03088233644789,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831058409500782,0.902382642468723,0.784250137270958,0.503464760927528,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p39@RABGAP1L | |short_description=p39@RABGAP1L | ||
}} | }} |
Latest revision as of 19:18, 18 September 2015
Short description: | p39@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_RABGAP1L_5end |
Coexpression cluster: | C3906_CD4_diffuse_acute_chronic_pancreas_gastrointestinal_temporal |
Association with transcript: | -15bp_to_uc001gkh.3_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.99e-30 | 1 |
mature B cell | 1.33e-15 | 2 |
pre-B-II cell | 1.33e-15 | 2 |
transitional stage B cell | 1.33e-15 | 2 |
small pre-B-II cell | 1.33e-15 | 2 |
immature B cell | 1.33e-15 | 2 |
precursor B cell | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.99e-30 | 1 |
lymphosarcoma | 9.99e-30 | 1 |