FFCP PHASE1:Hg19::chr3:50308296..50308307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7869 | |EntrezGene=7869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10724 | |HGNC=10724 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=304bp_to_ENST00000441915,uc003cyx.2_5end | |association_with_transcript=304bp_to_ENST00000441915,uc003cyx.2_5end | ||
|cluster_id=chr3:50308296..50308307,+ | |||
|description=CAGE_peak_9_at_SEMA3B_5end | |description=CAGE_peak_9_at_SEMA3B_5end | ||
|id=chr3:50308296..50308307,+ | |id=chr3:50308296..50308307,+ | ||
|ontology_enrichment_celltype=CL:0002150!8.23e-10!3;CL:0000861!8.23e-10!3 | |ontology_enrichment_celltype=CL:0002150!8.23e-10!3;CL:0000861!8.23e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.28e-09;42!CL:0002251;5.26e-09;20 | |ontology_enrichment_celltype_v019=CL:0002076;2.28e-09;42!CL:0002251;5.26e-09;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.59e-09,42;CL:0002251,5.26e-09,20;CL:0000223,6.02e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | |ontology_enrichment_development_v019=UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | ||
|ontology_enrichment_disease=DOID:305!5.53e-14!106;DOID:1749!2.31e-12!14;DOID:0050687!2.21e-09!143 | |ontology_enrichment_disease=DOID:305!5.53e-14!106;DOID:1749!2.31e-12!14;DOID:0050687!2.21e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.03e-26;14 | |ontology_enrichment_disease_v019=DOID:1749;3.03e-26;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.17e-26,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.98e-11!9;UBERON:0003343!1.79e-07!4;UBERON:0004785!1.79e-07!4 | |ontology_enrichment_uberon=UBERON:0001737!5.98e-11!9;UBERON:0003343!1.79e-07!4;UBERON:0004785!1.79e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.48e-40;4!UBERON:0004785;1.48e-40;4!UBERON:0000997;1.81e-40;1!UBERON:0005056;1.81e-40;1!UBERON:0004176;1.81e-40;1!UBERON:0000974;1.82e-27;6!UBERON:0001723;1.40e-14;3!UBERON:0001033;1.40e-14;3!UBERON:0003729;2.68e-13;13!UBERON:0000161;1.99e-09;19!UBERON:0000166;1.99e-09;19!UBERON:0000344;5.26e-09;20 | |ontology_enrichment_uberon_v019=UBERON:0003343;1.48e-40;4!UBERON:0004785;1.48e-40;4!UBERON:0000997;1.81e-40;1!UBERON:0005056;1.81e-40;1!UBERON:0004176;1.81e-40;1!UBERON:0000974;1.82e-27;6!UBERON:0001723;1.40e-14;3!UBERON:0001033;1.40e-14;3!UBERON:0003729;2.68e-13;13!UBERON:0000161;1.99e-09;19!UBERON:0000166;1.99e-09;19!UBERON:0000344;5.26e-09;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.48e-40,4;UBERON:0004785,1.48e-40,4;UBERON:0000997,2.21e-40,1;UBERON:0005056,2.21e-40,1;UBERON:0000974,5.90e-17,10;UBERON:0001723,1.40e-14,3;UBERON:0001033,1.40e-14,3;UBERON:0010056,1.40e-14,3;UBERON:0003729,2.68e-13,13;UBERON:0000344,5.26e-09,20;UBERON:0000166,2.82e-08,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.220587945464788,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25382514053069,0,0,0,0.774050650312681,0.584714536689484,0.328461828212837,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.329663433524666,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,4.51479505104718,0,0.183428598521679,3.9278726491115,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.891139200981258,0.4226557275834,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@SEMA3B | |short_description=p9@SEMA3B | ||
}} | }} |
Latest revision as of 19:22, 18 September 2015
Short description: | p9@SEMA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEMA3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 304bp_to_ENST00000441915, uc003cyx.2_5end |
EntrezGene: | SEMA3B |
HGNC: | 10724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.59e-09 | 42 |
epithelial cell of alimentary canal | 5.26e-09 | 20 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.48e-40 | 4 |
respiratory system mucosa | 1.48e-40 | 4 |
mammalian vulva | 2.21e-40 | 1 |
external female genitalia | 2.21e-40 | 1 |
neck | 5.90e-17 | 10 |
tongue | 1.40e-14 | 3 |
gustatory system | 1.40e-14 | 3 |
future tongue | 1.40e-14 | 3 |
mouth mucosa | 2.68e-13 | 13 |
mucosa | 5.26e-09 | 20 |
oral opening | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.17e-26 | 14 |