FFCP PHASE1:Hg19::chr17:1613600..1613658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=727910 | |EntrezGene=727910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33522 | |HGNC=33522 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGC4 | |UniProt=A6NGC4 | ||
|association_with_transcript=0bp_to_ENST00000330676_5end | |association_with_transcript=0bp_to_ENST00000330676_5end | ||
|cluster_id=chr17:1613600..1613658,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_1_at_TLCD2_5end | |description=CAGE_peak_1_at_TLCD2_5end | ||
|id=chr17:1613600..1613658,- | |id=chr17:1613600..1613658,- | ||
|ontology_enrichment_celltype=CL:0000136!1.11e-09!15;CL:0000066!1.63e-07!254;CL:0000057!5.65e-07!75;CL:0000223!6.92e-07!59 | |ontology_enrichment_celltype=CL:0000136!1.11e-09!15;CL:0000066!1.63e-07!254;CL:0000057!5.65e-07!75;CL:0000223!6.92e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.39e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.43e-14,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.04e-08;9!UBERON:0000042;5.04e-08;9!UBERON:0003688;2.34e-07;6!UBERON:0002358;2.34e-07;6!UBERON:0003684;2.34e-07;6!UBERON:0001178;2.34e-07;6!UBERON:0004921;5.09e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.81e-13,160;UBERON:0000925,7.81e-13,160;UBERON:0006595,7.81e-13,160;UBERON:0001007,1.41e-10,145;UBERON:0001555,1.41e-10,145;UBERON:0007026,1.41e-10,145;UBERON:0009569,3.45e-08,112;UBERON:0004921,1.33e-07,118;UBERON:0003688,2.41e-07,6;UBERON:0002358,2.41e-07,6;UBERON:0003684,2.41e-07,6;UBERON:0001178,2.41e-07,6 | |||
|phase1_expression=1.81678379270557,3.8538094300377,4.93340414335899,7.00513088471913,10.7270662662549,1.74467704820074,10.1319951267324,1.26343974685366,10.9697963843932,2.45733936501509,1.39560233594486,0.436882744260345,2.11013582582763,1.23766352960047,3.97676850873499,0,0,1.46062018077475,0.487932798790507,0.61560529038394,1.42800483870977,2.5076377718247,0,0,0.502170558379211,0,0,0,0,0,0,1.83884244895785,0.6024118375565,2.9580320813343,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,1.80719576192283,1.00267582127178,1.59331170856906,0,1.45990461090791,0.283604451492204,1.33037638477538,0.43917392846563,0.785874452986276,1.45718115317017,2.22470665670658,0.649094787309367,0.870648686496336,0.797747763113191,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,1.03366703667732,0,0.33472061276467,0.402829317109147,0,1.70843440283719,0,0,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,0,0,2.61656431285521,0.993943903390637,0.379891534993739,0.397227542439656,0.860509862246441,1.77334191099179,2.80338800071154,1.06748995729705,0.49333509683432,1.8672662123986,0.67355336034844,0.490385709340376,0.302714855289863,0.576175924479999,1.17160715916898,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0.323745888736263,0.280901613404497,1.42907919878425,0.122834317311768,1.75653827998801,1.18800285728205,2.71993622206413,0,2.87447256726495,0.168336113954066,0.500474079487857,1.38532057742091,1.31693286264251,0.612975591598039,5.40857012063748,0.226864366320042,0,1.06778694409284,2.33125091275518,1.50045548042201,1.13357782162283,0.257640540045629,0.744467425326359,0.506328996723799,0.487185025805993,1.00973509697646,2.02509777013059,3.07127507955743,0.710019185033229,0.201504196455281,0.67824236924195,0.773043412653187,1.63647672354501,1.14721838155602,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,6.50115099244771,3.60939740834793,0.354920400119532,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,1.47008711385542,2.53510069643662,7.86261773342101,11.8157981336281,0,1.59884970106048,0.171567810298526,0.98775256867763,1.1240175325762,0.100528972411631,0.277765335475589,1.95484983186195,2.07986957055916,1.44331342025273,0.811512834825538,0.70445216541493,0.577465791044295,0.462985512576611,0.570762456703795,1.58040879591855,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0.16798212819886,0.567100388969546,0.806026704325635,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0.224262168690721,1.30788020649984,0.07333828582095,1.03417372606222,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.799266537048298,1.57275793023962,3.7983512377401,1.64648067356154,0,1.42156779497018,0.791951872933429,0.904318131178758,3.48613383440118,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,3.50119364741774,0.542530047399471,0.207970861530807,1.78428988797162,0.946214490203608,0.819989904948992,5.71797589482666,0,6.2083842775503,0,0.368738337083406,1.56390506042549,0.783204629850962,2.40200396667599,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,1.24053903909388,0.306923946576125,1.68396056659844,2.43464383585832,8.18731598506726,4.3430558708774,4.45254199334973,0.154209693802656,0.532685175939381,0.657017248110473,0.519254429183621,0.348631135379878,0.846016147141356,0.601519410909855,1.65745780084613,1.37777337797528,0.364182336013434,1.70461739447251,1.80479845162965,0.924184045252977,0,0,0.633309773357254,0,0,0.215915916102139,0,0.541892875087706,3.01013864312912,0.509752546090077,2.49322802678617,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.325378394664303,1.13345112812495,0.0915694648183434,0.247528499761764,1.14853107599234,0.650060246036521,1.6068392984416,1.06337790121334,0.924291702687866,0.921022048356777,0.137836572484531,1.28904293841928,1.59518363305651,0.255679882248303,0.356128142586949,2.97512847649761,2.11409074101617,2.04180339991335,4.14746901507755,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.572499546967965,1.48863347743867,1.2655176988749,0.190630193923825,0.511795582622668,1.71175595213568,0,0,0.719489830333259,3.84351841630477,2.00281083987667,0.202182481573316,0,0,2.92580243453754,0.243713489631284,0,1.22849920267187,1.41405431953713,0,0,0,0,1.73632660280006,3.27947376023316,0.202910376962704,0.30982349809975,0.845086807596724,1.00387946542836,2.55447506634115,0.35667105148125,0,6.75544432952525,5.59801318031833,0.75894634753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|phase1_expression=1.81678379270557,3.8538094300377,4.93340414335899,7.00513088471913,10.7270662662549,1.74467704820074,10.1319951267324,1.26343974685366,10.9697963843932,2.45733936501509,1.39560233594486,0.436882744260345,2.11013582582763,1.23766352960047,3.97676850873499,0,0,1.46062018077475,0.487932798790507,0.61560529038394,1.42800483870977,2.5076377718247,0,0,0.502170558379211,0,0,0,0,0,0,1.83884244895785,0.6024118375565,2.9580320813343,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,1.80719576192283,1.00267582127178,1.59331170856906,0,1.45990461090791,0.283604451492204,1.33037638477538,0.43917392846563,0.785874452986276,1.45718115317017,2.22470665670658,0.649094787309367,0.870648686496336,0.797747763113191,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,1.03366703667732,0,0.33472061276467,0.402829317109147,0,1.70843440283719,0,0,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,0,0,2.61656431285521,0.993943903390637,0.379891534993739,0.397227542439656,0.860509862246441,1.77334191099179,2.80338800071154,1.06748995729705,0.49333509683432,1.8672662123986,0.67355336034844,0.490385709340376,0.302714855289863,0.576175924479999,1.17160715916898,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0.323745888736263,0.280901613404497,1.42907919878425,0.122834317311768,1.75653827998801,1.18800285728205,2.71993622206413,0,2.87447256726495,0.168336113954066,0.500474079487857,1.38532057742091,1.31693286264251,0.612975591598039,5.40857012063748,0.226864366320042,0,1.06778694409284,2.33125091275518,1.50045548042201,1.13357782162283,0.257640540045629,0.744467425326359,0.506328996723799,0.487185025805993,1.00973509697646,2.02509777013059,3.07127507955743,0.710019185033229,0.201504196455281,0.67824236924195,0.773043412653187,1.63647672354501,1.14721838155602,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,6.50115099244771,3.60939740834793,0.354920400119532,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,1.47008711385542,2.53510069643662,7.86261773342101,11.8157981336281,0,1.59884970106048,0.171567810298526,0.98775256867763,1.1240175325762,0.100528972411631,0.277765335475589,1.95484983186195,2.07986957055916,1.44331342025273,0.811512834825538,0.70445216541493,0.577465791044295,0.462985512576611,0.570762456703795,1.58040879591855,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0.16798212819886,0.567100388969546,0.806026704325635,0.581267877027924,0.383382679165211,0,0,0,0.144119953416961,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0.224262168690721,1.30788020649984,0.07333828582095,1.03417372606222,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.799266537048298,1.57275793023962,3.7983512377401,1.64648067356154,0,1.42156779497018,0.791951872933429,0.904318131178758,3.48613383440118,0.899756920638513,0,0,0,0.479249710983165,1.14861935834114,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,3.50119364741774,0.542530047399471,0.207970861530807,1.78428988797162,0.946214490203608,0.819989904948992,5.71797589482666,0,6.2083842775503,0,0.368738337083406,1.56390506042549,0.783204629850962,2.40200396667599,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,1.24053903909388,0.306923946576125,1.68396056659844,2.43464383585832,8.18731598506726,4.3430558708774,4.45254199334973,0.154209693802656,0.532685175939381,0.657017248110473,0.519254429183621,0.348631135379878,0.846016147141356,0.601519410909855,1.65745780084613,1.37777337797528,0.364182336013434,1.70461739447251,1.80479845162965,0.924184045252977,0,0,0.633309773357254,0,0,0.215915916102139,0,0.541892875087706,3.01013864312912,0.509752546090077,2.49322802678617,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.325378394664303,1.13345112812495,0.0915694648183434,0.247528499761764,1.14853107599234,0.650060246036521,1.6068392984416,1.06337790121334,0.924291702687866,0.921022048356777,0.137836572484531,1.28904293841928,1.59518363305651,0.255679882248303,0.356128142586949,2.97512847649761,2.11409074101617,2.04180339991335,4.14746901507755,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.572499546967965,1.48863347743867,1.2655176988749,0.190630193923825,0.511795582622668,1.71175595213568,0,0,0.719489830333259,3.84351841630477,2.00281083987667,0.202182481573316,0,0,2.92580243453754,0.243713489631284,0,1.22849920267187,1.41405431953713,0,0,0,0,1.73632660280006,3.27947376023316,0.202910376962704,0.30982349809975,0.845086807596724,1.00387946542836,2.55447506634115,0.35667105148125,0,6.75544432952525,5.59801318031833,0.75894634753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| ||
|short_description=p1@TLCD2 | |short_description=p1@TLCD2 | ||
}} | }} |
Latest revision as of 19:27, 18 September 2015
Short description: | p1@TLCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLCD2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000330676_5end |
EntrezGene: | TLCD2 |
HGNC: | 33522 |
UniProt: | A6NGC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.43e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.81e-13 | 160 |
endoderm | 7.81e-13 | 160 |
presumptive endoderm | 7.81e-13 | 160 |
digestive system | 1.41e-10 | 145 |
digestive tract | 1.41e-10 | 145 |
primitive gut | 1.41e-10 | 145 |
subdivision of trunk | 3.45e-08 | 112 |
subdivision of digestive tract | 1.33e-07 | 118 |
omentum | 2.41e-07 | 6 |
peritoneum | 2.41e-07 | 6 |
abdominal cavity | 2.41e-07 | 6 |
visceral peritoneum | 2.41e-07 | 6 |