FFCP PHASE1:Hg19::chr17:16283975..16283994,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:16283975..16283994,+
|short_description=p10@UBB
|description=CAGE_peak_10_at_UBB_5end
|association_with_transcript=-118bp_to_ENST00000302182_5end
|Entrez...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7314 | |EntrezGene=7314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12463 | |HGNC=12463 | ||
|TSSclassifier=strong | |||
|UniProt=P0CG47 | |UniProt=P0CG47 | ||
|association_with_transcript=-118bp_to_ENST00000302182_5end | |||
|cluster_id=chr17:16283975..16283994,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_10_at_UBB_5end | |||
|id=chr17:16283975..16283994,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.47e-08!25;CL:0000047!1.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.74e-13!94;UBERON:0001016!5.74e-13!94;UBERON:0005743!7.60e-12!86;UBERON:0001017!2.47e-11!82;UBERON:0002346!3.29e-08!90;UBERON:0000955!5.77e-08!69;UBERON:0006238!5.77e-08!69;UBERON:0000924!7.90e-08!173;UBERON:0006601!7.90e-08!173;UBERON:0003075!7.92e-08!86;UBERON:0007284!7.92e-08!86;UBERON:0004121!1.82e-07!169;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57;UBERON:0002616!5.85e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0002021;6.13e-08;5!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0002021,6.13e-08,5;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.366277859273374,0,0,0,0,0.193341436584244,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,0.874813840149763,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0,0.227884111694002,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,0,0.901940516486955,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0.327130788511688,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0.192687675289379,2.8339315265117,0,0,0.504143392443436,0.138314504928436,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0.596748666348824,0.225630985047772,0.20170506870352,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0.534434810531121,0,0,5.83495976280443,4.01946195234268,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.366277859273374,0,0,0,0,0.193341436584244,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.463840490809256,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,0.874813840149763,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0,0.227884111694002,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,0,0.30607276163049,0,0.901940516486955,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0.0882561266915003,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0.408610218334727,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.248385611765534,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0.327130788511688,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,0.192687675289379,2.8339315265117,0,0,0.504143392443436,0.138314504928436,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0.596748666348824,0.225630985047772,0.20170506870352,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0.175871244359621,0.255524855279191,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0.534434810531121,0,0,5.83495976280443,4.01946195234268,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p10@UBB | |||
}} | }} |
Latest revision as of 19:40, 18 September 2015
Short description: | p10@UBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_UBB_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -118bp_to_ENST00000302182_5end |
EntrezGene: | UBB |
HGNC: | 12463 |
UniProt: | P0CG47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
occipital lobe | 6.13e-08 | 5 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |