FFCP PHASE1:Hg19::chr2:179672142..179672157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7273 | |EntrezGene=7273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12403 | |HGNC=12403 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET18,A6NKB1,E7EQE6,Q8WZ42,E9PPD3 | |UniProt=E7ET18,A6NKB1,E7EQE6,Q8WZ42,E9PPD3 | ||
|association_with_transcript=0bp_to_ENST00000342175,ENST00000342992,ENST00000359218,ENST00000360870,ENST00000460472,NM_003319,NM_133378,NM_133379,NM_133432,NM_133437,uc002unb.2,uc002und.2,uc010zfg.1,uc010zfh.1,uc010zfi.1,uc010zfj.1_5end | |association_with_transcript=0bp_to_ENST00000342175,ENST00000342992,ENST00000359218,ENST00000360870,ENST00000460472,NM_003319,NM_133378,NM_133379,NM_133432,NM_133437,uc002unb.2,uc002und.2,uc010zfg.1,uc010zfh.1,uc010zfi.1,uc010zfj.1_5end | ||
|cluster_id=chr2:179672142..179672157,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_1_at_TTN_5end | |description=CAGE_peak_1_at_TTN_5end | ||
|id=chr2:179672142..179672157,- | |id=chr2:179672142..179672157,- | ||
|ontology_enrichment_celltype=CL:0000188!7.55e-09!9 | |ontology_enrichment_celltype=CL:0000188!7.55e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;7.52e-13;9!CL:0000680;2.83e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.48e-13,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.15e-39!115;UBERON:0002780!4.40e-11!41;UBERON:0001890!4.40e-11!41;UBERON:0006240!4.40e-11!41;UBERON:0003080!1.18e-10!42;UBERON:0001049!1.20e-10!57;UBERON:0005068!1.20e-10!57;UBERON:0006241!1.20e-10!57;UBERON:0007135!1.20e-10!57;UBERON:0001893!1.06e-09!34;UBERON:0001869!1.46e-09!32;UBERON:0002020!1.61e-09!34;UBERON:0003528!1.61e-09!34;UBERON:0003075!2.33e-09!86;UBERON:0007284!2.33e-09!86;UBERON:0002616!3.49e-09!59;UBERON:0002791!5.20e-09!33;UBERON:0000955!5.39e-09!69;UBERON:0006238!5.39e-09!69;UBERON:0001017!9.65e-09!82;UBERON:0005743!1.39e-08!86;UBERON:0002346!1.70e-08!90;UBERON:0000153!8.63e-08!129;UBERON:0007811!8.63e-08!129;UBERON:0000073!1.80e-07!94;UBERON:0001016!1.80e-07!94;UBERON:0003056!3.59e-07!61;UBERON:0007100!3.88e-07!27;UBERON:0000481!4.45e-07!347;UBERON:0002308!5.33e-07!9;UBERON:0000125!5.33e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!8.15e-39!115;UBERON:0002780!4.40e-11!41;UBERON:0001890!4.40e-11!41;UBERON:0006240!4.40e-11!41;UBERON:0003080!1.18e-10!42;UBERON:0001049!1.20e-10!57;UBERON:0005068!1.20e-10!57;UBERON:0006241!1.20e-10!57;UBERON:0007135!1.20e-10!57;UBERON:0001893!1.06e-09!34;UBERON:0001869!1.46e-09!32;UBERON:0002020!1.61e-09!34;UBERON:0003528!1.61e-09!34;UBERON:0003075!2.33e-09!86;UBERON:0007284!2.33e-09!86;UBERON:0002616!3.49e-09!59;UBERON:0002791!5.20e-09!33;UBERON:0000955!5.39e-09!69;UBERON:0006238!5.39e-09!69;UBERON:0001017!9.65e-09!82;UBERON:0005743!1.39e-08!86;UBERON:0002346!1.70e-08!90;UBERON:0000153!8.63e-08!129;UBERON:0007811!8.63e-08!129;UBERON:0000073!1.80e-07!94;UBERON:0001016!1.80e-07!94;UBERON:0003056!3.59e-07!61;UBERON:0007100!3.88e-07!27;UBERON:0000481!4.45e-07!347;UBERON:0002308!5.33e-07!9;UBERON:0000125!5.33e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.96e-25;16!UBERON:0002036;2.96e-25;16!UBERON:0002385;2.46e-12;31!UBERON:0001015;2.46e-12;31!UBERON:0000383;2.46e-12;31!UBERON:0007023;3.48e-08;114!UBERON:0003978;1.76e-07;3!UBERON:0000946;1.76e-07;3!UBERON:0004151;1.99e-07;3!UBERON:0000369;2.57e-07;4!UBERON:0002435;2.57e-07;4!UBERON:0000204;2.57e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.11e-27,114;UBERON:0003978,1.76e-07,3;UBERON:0009751,1.76e-07,3;UBERON:0000946,1.76e-07,3;UBERON:0002523,1.76e-07,3;UBERON:0005983,1.76e-07,3;UBERON:0002165,1.76e-07,3;UBERON:0002062,1.76e-07,3;UBERON:0007280,1.76e-07,3;UBERON:0004151,1.99e-07,3;UBERON:0000369,2.53e-07,4;UBERON:0002435,2.53e-07,4;UBERON:0000204,2.53e-07,4;UBERON:0010082,2.53e-07,4 | |||
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| ||
|short_description=p1@TTN | |short_description=p1@TTN | ||
}} | }} |
Latest revision as of 19:51, 18 September 2015
Short description: | p1@TTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTN_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000342175, ENST00000342992, ENST00000359218, ENST00000360870, ENST00000460472, NM_003319, NM_133378, NM_133379, NM_133432, NM_133437, uc002unb.2, uc002und.2, uc010zfg.1, uc010zfh.1, uc010zfi.1, uc010zfj.1_5end |
EntrezGene: | TTN |
HGNC: | 12403 |
UniProt: | E7ET18A6NKB1E7EQE6Q8WZ42E9PPD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.48e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.11e-27 | 114 |
valve | 1.76e-07 | 3 |
cardiac mesenchyme | 1.76e-07 | 3 |
cardial valve | 1.76e-07 | 3 |
tunica intima | 1.76e-07 | 3 |
heart layer | 1.76e-07 | 3 |
endocardium | 1.76e-07 | 3 |
endocardial cushion | 1.76e-07 | 3 |
presumptive endocardium | 1.76e-07 | 3 |
cardiac chamber | 1.99e-07 | 3 |
corpus striatum | 2.53e-07 | 4 |
striatum | 2.53e-07 | 4 |
ventral part of telencephalon | 2.53e-07 | 4 |
future corpus striatum | 2.53e-07 | 4 |