FFCP PHASE1:Hg19::chr2:88752207..88752218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=344167 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=35123 | |HGNC=35123 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=-76bp_to_ENST00000398142_5end | |association_with_transcript=-76bp_to_ENST00000398142_5end | ||
|cluster_id=chr2:88752207..88752218,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_FOXI3_5end | |description=CAGE_peak_1_at_FOXI3_5end | ||
|id=chr2:88752207..88752218,- | |id=chr2:88752207..88752218,- | ||
|ontology_enrichment_celltype=CL:0000039!6.32e-21!7;CL:0000586!6.32e-21!7;CL:0000540!9.18e-17!6;CL:0000031!9.18e-17!6;CL:0000404!9.18e-17!6;CL:0002322!2.62e-15!5;CL:0000047!2.25e-12!8;CL:0000064!9.19e-09!3;CL:0005012!9.19e-09!3;CL:0000067!9.19e-09!3;CL:0002304!9.19e-09!3 | |ontology_enrichment_celltype=CL:0000039!6.32e-21!7;CL:0000586!6.32e-21!7;CL:0000540!9.18e-17!6;CL:0000031!9.18e-17!6;CL:0000404!9.18e-17!6;CL:0002322!2.62e-15!5;CL:0000047!2.25e-12!8;CL:0000064!9.19e-09!3;CL:0005012!9.19e-09!3;CL:0000067!9.19e-09!3;CL:0002304!9.19e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.31e-35;7!CL:0000586;5.31e-35;7!CL:0000540;9.61e-28;6!CL:0000404;9.61e-28;6!CL:0002322;2.81e-25;5!CL:0002321;3.08e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.60e-35,7;CL:0000586,5.60e-35,7;CL:0000540,8.96e-28,6;CL:0000031,8.96e-28,6;CL:0000404,8.96e-28,6;CL:0002322,2.95e-25,5;CL:0000047,1.05e-20,8 | |||
|ontology_enrichment_development_v019=CL:0000031;9.61e-28;6!UBERON:0009117;1.63e-12;10!UBERON:0005564;1.63e-12;10 | |||
|ontology_enrichment_disease=DOID:3095!6.44e-20!22;DOID:2994!6.44e-20!22;DOID:0050687!5.21e-12!143;DOID:305!1.71e-08!106 | |ontology_enrichment_disease=DOID:3095!6.44e-20!22;DOID:2994!6.44e-20!22;DOID:0050687!5.21e-12!143;DOID:305!1.71e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-30;22!DOID:2994;3.26e-30;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.36e-30,22;DOID:2994,3.36e-30,22;DOID:0050687,5.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.19e-11!4;UBERON:0000473!5.70e-09!8;UBERON:0001778!9.19e-09!3;UBERON:0001775!9.19e-09!3;UBERON:0002203!2.43e-07!6;UBERON:0001768!2.43e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.00e-10;49!UBERON:0000473;1.94e-10;8!UBERON:0003135;1.34e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.99e-10,8;UBERON:0003135,1.37e-07,11 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70162670895322,0.886917589850256,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3677650210156,14.0481554420774,12.548945829908,10.366105501537,20.6903097718015,9.12443397689575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,12.9842053572086,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.53735113621709,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,1.82299432759663,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,26.745412909015,24.0550487018189,7.27937391877454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,7.21552413189564,4.14752765588989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50108815702054,7.83974788604233,4.56984371832104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9670701262027,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0.115525666150338,0,0,0,0,0,0,22.0001623364395,0,0,0,0,0,0,0,0,0,1.58284119923659,0.127762427639595,0,0,0,0.682986574053893,5.32214220975833,0,0,0,0,0,0,0,0,0,0,0,0,7.8624198594322,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,0.447421727191169,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0.45178432815584,0.219881033490858,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,1.42843150884526,0,0,0,0,0,0,0,0,0,0,0,0,6.5606540914241,11.9099473440428,2.02717601618299,26.4151069031733,52.3746114320499,62.7642163822991,3.50990555009325,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@FOXI3 | |short_description=p1@FOXI3 | ||
}} | }} |
Latest revision as of 20:39, 18 September 2015
Short description: | p1@FOXI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXI3_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -76bp_to_ENST00000398142_5end |
EntrezGene: | FOXI3 |
HGNC: | 35123 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.60e-35 | 7 |
germ cell | 5.60e-35 | 7 |
neuron | 8.96e-28 | 6 |
neuroblast | 8.96e-28 | 6 |
electrically signaling cell | 8.96e-28 | 6 |
embryonic stem cell | 2.95e-25 | 5 |
neuronal stem cell | 1.05e-20 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.99e-10 | 8 |
male reproductive organ | 1.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.36e-30 | 22 |
germ cell cancer | 3.36e-30 | 22 |
cell type cancer | 5.56e-07 | 143 |