FFCP PHASE1:Hg19::chr17:16875371..16875447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23495 | |EntrezGene=23495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18153 | |HGNC=18153 | ||
|TSSclassifier=strong | |||
|UniProt=O14836,E7ER05,Q4ACX1 | |UniProt=O14836,E7ER05,Q4ACX1 | ||
|association_with_transcript=0bp_to_ENST00000261652,ENST00000437538,NM_012452,uc002gqs.1,uc002gqt.1,uc010vwt.1,uc010vwu.1_5end | |association_with_transcript=0bp_to_ENST00000261652,ENST00000437538,NM_012452,uc002gqs.1,uc002gqt.1,uc010vwt.1,uc010vwu.1_5end | ||
|cluster_id=chr17:16875371..16875447,- | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_1_at_TNFRSF13B_5end | |description=CAGE_peak_1_at_TNFRSF13B_5end | ||
|id=chr17:16875371..16875447,- | |id=chr17:16875371..16875447,- | ||
|ontology_enrichment_celltype=CL:0000945!4.27e-36!24;CL:0000826!4.27e-36!24;CL:0002087!1.02e-28!119;CL:0000738!1.35e-28!140;CL:0000542!5.09e-28!53;CL:0000051!5.09e-28!53;CL:0000838!8.14e-27!52;CL:0002031!6.34e-23!124;CL:0000236!1.50e-21!14;CL:0000037!1.92e-19!172;CL:0000566!1.92e-19!172;CL:0000988!2.72e-17!182;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165 | |ontology_enrichment_celltype=CL:0000945!4.27e-36!24;CL:0000826!4.27e-36!24;CL:0002087!1.02e-28!119;CL:0000738!1.35e-28!140;CL:0000542!5.09e-28!53;CL:0000051!5.09e-28!53;CL:0000838!8.14e-27!52;CL:0002031!6.34e-23!124;CL:0000236!1.50e-21!14;CL:0000037!1.92e-19!172;CL:0000566!1.92e-19!172;CL:0000988!2.72e-17!182;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.48e-63;24!CL:0000236;1.54e-34;13!CL:0000542;1.97e-18;53!CL:0002087;3.66e-08;104!CL:0000226;4.55e-08;3!CL:0000842;4.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.91e-63,24;CL:0000826,3.91e-63,24;CL:0000236,4.01e-37,14;CL:0000542,2.93e-29,53;CL:0000051,2.93e-29,53;CL:0000838,1.81e-27,52;CL:0002087,1.54e-20,115;CL:0000738,4.17e-18,136;CL:0002031,2.16e-14,120;CL:0000037,8.57e-13,168;CL:0000988,1.17e-11,177;CL:0002032,2.90e-10,161;CL:0000837,2.90e-10,161;CL:0000817,7.15e-09,3;CL:0000226,4.50e-08,3;CL:0000842,4.50e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-18;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.20e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.48e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.75e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-18!115;UBERON:0000178!1.79e-12!15;UBERON:0000179!1.79e-12!15;UBERON:0000463!1.79e-12!15;UBERON:0002390!1.04e-11!102;UBERON:0003061!1.04e-11!102;UBERON:0002193!2.60e-11!112 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-18!115;UBERON:0000178!1.79e-12!15;UBERON:0000179!1.79e-12!15;UBERON:0000463!1.79e-12!15;UBERON:0002390!1.04e-11!102;UBERON:0003061!1.04e-11!102;UBERON:0002193!2.60e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.56e-22;15!UBERON:0000179;5.56e-22;15!UBERON:0000463;5.56e-22;15!UBERON:0002390;4.28e-18;32!UBERON:0002193;2.72e-12;42!UBERON:0002106;2.49e-09;3!UBERON:0004177;5.26e-09;5!UBERON:0005057;5.26e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.59e-22,15;UBERON:0000179,6.59e-22,15;UBERON:0000463,6.59e-22,15;UBERON:0007023,3.92e-10,114;UBERON:0002106,2.49e-09,3;UBERON:0004854,2.49e-09,3;UBERON:0009034,2.49e-09,3;UBERON:0002095,2.49e-09,3;UBERON:0004782,2.49e-09,3;UBERON:0003281,2.49e-09,3;UBERON:0009664,2.49e-09,3;UBERON:0002296,2.49e-09,3;UBERON:0005602,2.49e-09,3;UBERON:0001179,2.49e-09,3;UBERON:0006293,2.49e-09,3;UBERON:0002193,5.78e-09,108;UBERON:0002390,1.77e-08,98;UBERON:0003061,1.77e-08,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.927937895585,193.018485796822,217.871442676264,0,0,0.309632246632152,0,0,0,1.08454080812422,71.3689547086856,0,0,0,0,0,2.91504299417082,0,0.145398238779565,1.13362783106643,0,0,0.822335776043652,0.309706370895104,0,2.30544635876191,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0,1.19678194572979,0,0.290209238628584,0.56738522469114,0,0.251248665256743,1.5644487552606,0,1.81619850790011,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,75.6783851183688,62.259801683883,48.9230089624955,51.6343569305474,65.26454588687,51.152967155949,59.4940385506376,47.7026877267682,50.0907412816315,68.1195139670289,82.1887440469242,10.5737062863221,1.68152568894461,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,1.6711568532776,0.883817722424512,0.443067789167242,1.89562704635511,2.17755243533648,6.24284868287415,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.451725357233318,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.37285620900479,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,6.08937131078603,3.0585488285695,4.5571774973933,7.14695326373367,6.9931586424653,3.8908398671563,1.08006287447623,5.55187623405989,0,0,0,38.6470604261495,3.89526875036401,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34330152832435,0,0,0,0,0,0,0,0,0,0.398495976502139,25.6944041443967,0,0.102268682502155,284.448985420532,0,0.0898683511473268,0,0,2.17015492401254,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,4.33442066066362,1.83309043480088,0,0,0,0.067401132980677,0,0,31.7471333235259,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78257164304836,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,44.9615393269316,0,0,0,0,0,0,0,0,0,0.709251365692784,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9221734262185,0,1.24271716604159,17.3658107634183,70.942575851362,26.5507864470353,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,63.8917574541626,0,0,0,0,0,0,0,0,0,0,0,0,0,63.4048429810077,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0,0,0,2.74128883428591,0,0,0,0,0,0,0,0,54.3904421263278,0,0,0,0,0,1.02041020705668,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,3.8720462293825,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,5.09349443512435,0.437119121007915,0,0,0,0.196308467114945,0,0,0,55.4505116081136,19.7241137199146,133.921148939405,0,0,0,0,15.1380663523498,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,5.5440835294255,0,0.968833647540092,1.48979314310059,0,0.0636471582781649,0,1.08858373948481,0,46.8770288981529,3.9447212965972,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,16.1019034872821,195.546780304972 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,229.927937895585,193.018485796822,217.871442676264,0,0,0.309632246632152,0,0,0,1.08454080812422,71.3689547086856,0,0,0,0,0,2.91504299417082,0,0.145398238779565,1.13362783106643,0,0,0.822335776043652,0.309706370895104,0,2.30544635876191,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0.320929027076094,0,0,1.19678194572979,0,0.290209238628584,0.56738522469114,0,0.251248665256743,1.5644487552606,0,1.81619850790011,1.84138817993782,0.316462387440884,0,0,0,0,0,0,0,0,0,75.6783851183688,62.259801683883,48.9230089624955,51.6343569305474,65.26454588687,51.152967155949,59.4940385506376,47.7026877267682,50.0907412816315,68.1195139670289,82.1887440469242,10.5737062863221,1.68152568894461,0.263384084775077,0.196709770113833,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,1.6711568532776,0.883817722424512,0.443067789167242,1.89562704635511,2.17755243533648,6.24284868287415,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.451725357233318,0.383959833463255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,2.37285620900479,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,6.08937131078603,3.0585488285695,4.5571774973933,7.14695326373367,6.9931586424653,3.8908398671563,1.08006287447623,5.55187623405989,0,0,0,38.6470604261495,3.89526875036401,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34330152832435,0,0,0,0,0,0,0,0,0,0.398495976502139,25.6944041443967,0,0.102268682502155,284.448985420532,0,0.0898683511473268,0,0,2.17015492401254,7.18449277040819,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,4.33442066066362,1.83309043480088,0,0,0,0.067401132980677,0,0,31.7471333235259,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78257164304836,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,44.9615393269316,0,0,0,0,0,0,0,0,0,0.709251365692784,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9221734262185,0,1.24271716604159,17.3658107634183,70.942575851362,26.5507864470353,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,63.8917574541626,0,0,0,0,0,0,0,0,0,0,0,0,0,63.4048429810077,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0,0,0,2.74128883428591,0,0,0,0,0,0,0,0,54.3904421263278,0,0,0,0,0,1.02041020705668,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,3.8720462293825,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,5.09349443512435,0.437119121007915,0,0,0,0.196308467114945,0,0,0,55.4505116081136,19.7241137199146,133.921148939405,0,0,0,0,15.1380663523498,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.103432995861895,5.5440835294255,0,0.968833647540092,1.48979314310059,0,0.0636471582781649,0,1.08858373948481,0,46.8770288981529,3.9447212965972,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,16.1019034872821,195.546780304972 | ||
|short_description=p1@TNFRSF13B | |short_description=p1@TNFRSF13B | ||
}} | }} |
Latest revision as of 20:48, 18 September 2015
Short description: | p1@TNFRSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF13B_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | 0bp_to_ENST00000261652, ENST00000437538, NM_012452, uc002gqs.1, uc002gqt.1, uc010vwt.1, uc010vwu.1_5end |
EntrezGene: | TNFRSF13B |
HGNC: | 18153 |
UniProt: | O14836E7ER05Q4ACX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.91e-63 | 24 |
pro-B cell | 3.91e-63 | 24 |
B cell | 4.01e-37 | 14 |
lymphocyte | 2.93e-29 | 53 |
common lymphoid progenitor | 2.93e-29 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-27 | 52 |
nongranular leukocyte | 1.54e-20 | 115 |
leukocyte | 4.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-14 | 120 |
hematopoietic stem cell | 8.57e-13 | 168 |
hematopoietic cell | 1.17e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.90e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-10 | 161 |
precursor B cell | 7.15e-09 | 3 |
single nucleate cell | 4.50e-08 | 3 |
mononuclear cell | 4.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.59e-22 | 15 |
haemolymphatic fluid | 6.59e-22 | 15 |
organism substance | 6.59e-22 | 15 |
adult organism | 3.92e-10 | 114 |
spleen | 2.49e-09 | 3 |
gastrointestinal system mesentery | 2.49e-09 | 3 |
stomach region | 2.49e-09 | 3 |
mesentery | 2.49e-09 | 3 |
gastrointestinal system serosa | 2.49e-09 | 3 |
mesentery of stomach | 2.49e-09 | 3 |
gut mesentery | 2.49e-09 | 3 |
dorsal mesentery | 2.49e-09 | 3 |
dorsal mesogastrium | 2.49e-09 | 3 |
peritoneal cavity | 2.49e-09 | 3 |
spleen primordium | 2.49e-09 | 3 |
hemolymphoid system | 5.78e-09 | 108 |
hematopoietic system | 1.77e-08 | 98 |
blood island | 1.77e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.75e-12 | 10 |