FFCP PHASE1:Hg19::chr17:16875371..16875447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23495 | |EntrezGene=23495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18153 | |HGNC=18153 | ||
|TSSclassifier=strong | |||
|UniProt=O14836,E7ER05,Q4ACX1 | |UniProt=O14836,E7ER05,Q4ACX1 | ||
|association_with_transcript=0bp_to_ENST00000261652,ENST00000437538,NM_012452,uc002gqs.1,uc002gqt.1,uc010vwt.1,uc010vwu.1_5end | |association_with_transcript=0bp_to_ENST00000261652,ENST00000437538,NM_012452,uc002gqs.1,uc002gqt.1,uc010vwt.1,uc010vwu.1_5end | ||
|cluster_id=chr17:16875371..16875447,- | |||
|coexpression_cluster_id=C342 | |coexpression_cluster_id=C342 | ||
|description=CAGE_peak_1_at_TNFRSF13B_5end | |description=CAGE_peak_1_at_TNFRSF13B_5end | ||
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|ontology_enrichment_celltype=CL:0000945!4.27e-36!24;CL:0000826!4.27e-36!24;CL:0002087!1.02e-28!119;CL:0000738!1.35e-28!140;CL:0000542!5.09e-28!53;CL:0000051!5.09e-28!53;CL:0000838!8.14e-27!52;CL:0002031!6.34e-23!124;CL:0000236!1.50e-21!14;CL:0000037!1.92e-19!172;CL:0000566!1.92e-19!172;CL:0000988!2.72e-17!182;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165 | |ontology_enrichment_celltype=CL:0000945!4.27e-36!24;CL:0000826!4.27e-36!24;CL:0002087!1.02e-28!119;CL:0000738!1.35e-28!140;CL:0000542!5.09e-28!53;CL:0000051!5.09e-28!53;CL:0000838!8.14e-27!52;CL:0002031!6.34e-23!124;CL:0000236!1.50e-21!14;CL:0000037!1.92e-19!172;CL:0000566!1.92e-19!172;CL:0000988!2.72e-17!182;CL:0002032!1.13e-16!165;CL:0000837!1.13e-16!165 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.48e-63;24!CL:0000236;1.54e-34;13!CL:0000542;1.97e-18;53!CL:0002087;3.66e-08;104!CL:0000226;4.55e-08;3!CL:0000842;4.55e-08;3 | |ontology_enrichment_celltype_v019=CL:0000945;3.48e-63;24!CL:0000236;1.54e-34;13!CL:0000542;1.97e-18;53!CL:0002087;3.66e-08;104!CL:0000226;4.55e-08;3!CL:0000842;4.55e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.91e-63,24;CL:0000826,3.91e-63,24;CL:0000236,4.01e-37,14;CL:0000542,2.93e-29,53;CL:0000051,2.93e-29,53;CL:0000838,1.81e-27,52;CL:0002087,1.54e-20,115;CL:0000738,4.17e-18,136;CL:0002031,2.16e-14,120;CL:0000037,8.57e-13,168;CL:0000988,1.17e-11,177;CL:0002032,2.90e-10,161;CL:0000837,2.90e-10,161;CL:0000817,7.15e-09,3;CL:0000226,4.50e-08,3;CL:0000842,4.50e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.97e-18;53 | |ontology_enrichment_development_v019=CL:0000051;1.97e-18;53 | ||
|ontology_enrichment_disease=DOID:0060058!3.20e-07!10 | |ontology_enrichment_disease=DOID:0060058!3.20e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.48e-12;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.48e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.75e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-18!115;UBERON:0000178!1.79e-12!15;UBERON:0000179!1.79e-12!15;UBERON:0000463!1.79e-12!15;UBERON:0002390!1.04e-11!102;UBERON:0003061!1.04e-11!102;UBERON:0002193!2.60e-11!112 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-18!115;UBERON:0000178!1.79e-12!15;UBERON:0000179!1.79e-12!15;UBERON:0000463!1.79e-12!15;UBERON:0002390!1.04e-11!102;UBERON:0003061!1.04e-11!102;UBERON:0002193!2.60e-11!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.56e-22;15!UBERON:0000179;5.56e-22;15!UBERON:0000463;5.56e-22;15!UBERON:0002390;4.28e-18;32!UBERON:0002193;2.72e-12;42!UBERON:0002106;2.49e-09;3!UBERON:0004177;5.26e-09;5!UBERON:0005057;5.26e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.56e-22;15!UBERON:0000179;5.56e-22;15!UBERON:0000463;5.56e-22;15!UBERON:0002390;4.28e-18;32!UBERON:0002193;2.72e-12;42!UBERON:0002106;2.49e-09;3!UBERON:0004177;5.26e-09;5!UBERON:0005057;5.26e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.59e-22,15;UBERON:0000179,6.59e-22,15;UBERON:0000463,6.59e-22,15;UBERON:0007023,3.92e-10,114;UBERON:0002106,2.49e-09,3;UBERON:0004854,2.49e-09,3;UBERON:0009034,2.49e-09,3;UBERON:0002095,2.49e-09,3;UBERON:0004782,2.49e-09,3;UBERON:0003281,2.49e-09,3;UBERON:0009664,2.49e-09,3;UBERON:0002296,2.49e-09,3;UBERON:0005602,2.49e-09,3;UBERON:0001179,2.49e-09,3;UBERON:0006293,2.49e-09,3;UBERON:0002193,5.78e-09,108;UBERON:0002390,1.77e-08,98;UBERON:0003061,1.77e-08,98 | |||
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|short_description=p1@TNFRSF13B | |short_description=p1@TNFRSF13B | ||
}} | }} |
Latest revision as of 20:48, 18 September 2015
Short description: | p1@TNFRSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF13B_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | 0bp_to_ENST00000261652, ENST00000437538, NM_012452, uc002gqs.1, uc002gqt.1, uc010vwt.1, uc010vwu.1_5end |
EntrezGene: | TNFRSF13B |
HGNC: | 18153 |
UniProt: | O14836E7ER05Q4ACX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.91e-63 | 24 |
pro-B cell | 3.91e-63 | 24 |
B cell | 4.01e-37 | 14 |
lymphocyte | 2.93e-29 | 53 |
common lymphoid progenitor | 2.93e-29 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-27 | 52 |
nongranular leukocyte | 1.54e-20 | 115 |
leukocyte | 4.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-14 | 120 |
hematopoietic stem cell | 8.57e-13 | 168 |
hematopoietic cell | 1.17e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.90e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-10 | 161 |
precursor B cell | 7.15e-09 | 3 |
single nucleate cell | 4.50e-08 | 3 |
mononuclear cell | 4.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.59e-22 | 15 |
haemolymphatic fluid | 6.59e-22 | 15 |
organism substance | 6.59e-22 | 15 |
adult organism | 3.92e-10 | 114 |
spleen | 2.49e-09 | 3 |
gastrointestinal system mesentery | 2.49e-09 | 3 |
stomach region | 2.49e-09 | 3 |
mesentery | 2.49e-09 | 3 |
gastrointestinal system serosa | 2.49e-09 | 3 |
mesentery of stomach | 2.49e-09 | 3 |
gut mesentery | 2.49e-09 | 3 |
dorsal mesentery | 2.49e-09 | 3 |
dorsal mesogastrium | 2.49e-09 | 3 |
peritoneal cavity | 2.49e-09 | 3 |
spleen primordium | 2.49e-09 | 3 |
hemolymphoid system | 5.78e-09 | 108 |
hematopoietic system | 1.77e-08 | 98 |
blood island | 1.77e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.75e-12 | 10 |