FFCP PHASE2:Hg19::chr7:47493297..47493315,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64759 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:21616 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21616 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JWN9 | ||
|association_with_transcript=-468bp_to_ENST00000413551_5end | |association_with_transcript=-468bp_to_ENST00000413551_5end | ||
|cluster_id=chr7:47493297..47493315,- | |cluster_id=chr7:47493297..47493315,- |
Latest revision as of 20:50, 18 September 2015
Short description: | p20@TNS3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TNS3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -468bp_to_ENST00000413551_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | C9JWN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p20@TNS3 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.65e-12 | 1 |
myotube | 3.65e-12 | 1 |
monopoietic cell | 3.56e-10 | 59 |
monocyte | 3.56e-10 | 59 |
monoblast | 3.56e-10 | 59 |
promonocyte | 3.56e-10 | 59 |
defensive cell | 6.32e-10 | 48 |
phagocyte | 6.32e-10 | 48 |
macrophage dendritic cell progenitor | 8.12e-10 | 61 |
myeloid lineage restricted progenitor cell | 5.15e-09 | 66 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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bone marrow | 1.01e-07 | 76 |
extraembryonic membrane | 1.85e-07 | 14 |
membranous layer | 1.85e-07 | 14 |
chorion | 4.08e-07 | 7 |
bone element | 4.26e-07 | 82 |
Showing 1 to 5 of 5 entries