FFCP PHASE1:Hg19::chr5:78281580..78281593,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:78281580..78281593,-
|short_description=p9@ARSB
|description=CAGE_peak_9_at_ARSB_5end
|association_with_transcript=14bp_to_ENST00000264914_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=411 | |EntrezGene=411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |HGNC=714 | ||
|TSSclassifier=strong | |||
|UniProt=P15848 | |UniProt=P15848 | ||
|association_with_transcript=14bp_to_ENST00000264914_5end | |||
|cluster_id=chr5:78281580..78281593,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_9_at_ARSB_5end | |||
|id=chr5:78281580..78281593,- | |||
|ontology_enrichment_celltype=CL:0000945!1.62e-07!24;CL:0000826!1.62e-07!24;CL:0002334!3.60e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002580;3.38e-14;3!CL:0000182;6.44e-14;12!CL:0002334;1.82e-13;12!CL:0002581;2.81e-11;1!CL:0000153;1.66e-10;9!CL:0000447;1.66e-10;9!CL:0000138;1.52e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.42e-14,3;CL:0000182,7.25e-14,12;CL:0002334,1.94e-13,12;CL:0002581,2.68e-11,1;CL:0000153,1.53e-10,9;CL:0000447,1.53e-10,9;CL:0000058,1.17e-07,6;CL:0000138,1.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.65e-09;11!UBERON:0009497;9.75e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.81e-11;1!DOID:1357;2.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.78e-11,1;DOID:1357,1.78e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.81e-11;1!UBERON:0001825;2.81e-11;1!UBERON:0000310;1.65e-09;10!UBERON:0002107;7.38e-09;19!UBERON:0006925;7.38e-09;19!UBERON:0001443;1.08e-08;11!UBERON:0002423;9.18e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.78e-11,1;UBERON:0001825,1.78e-11,1;UBERON:0007499,3.95e-10,25;UBERON:0009856,9.82e-10,26;UBERON:0000310,1.18e-09,10;UBERON:0002107,7.94e-09,19;UBERON:0006925,7.94e-09,19;UBERON:0008836,7.94e-09,19;UBERON:0001443,7.99e-09,11;UBERON:0008835,1.21e-07,22;UBERON:0003894,1.21e-07,22;UBERON:0009854,2.58e-07,23;UBERON:0009497,9.69e-07,25;UBERON:0000015,9.69e-07,25;UBERON:0002423,9.69e-07,25;UBERON:0006235,9.69e-07,25;UBERON:0004161,9.69e-07,25 | |||
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|phase1_expression=1.81678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0.61130724598361,0.821005894499457,0.472264687882075,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,1.50401373190767,0.289693037921647,1.5905718941022,0,0,0,0.351339142772504,0.130979075497713,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.506328996723799,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0.614942192715568,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.256686072559497,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0.213455115606889,0,0,0,1.48864684691266,1.53461973288062,0.561320188866147,0.640695746278505,1.02341449813341,0.64341568457443,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.445773537109913,2.84136146806413,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0.552567831062295,0.503865495708552,0.715880777515084,0.123084805461069,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0.86494757262552,0.730953646538188,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,1.02956998717179,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,9.37519869455961,8.90091270516598,9.84091740271099,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0.2249738915515,0,0.242998226632099,0,0.157611414598396,0.209818352539992,0.105600336519406,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0,0,0,0.58620893471233,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,1.57054096250234,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,1.24411862352257,0.53168342911599,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,1.41696576325585,0,0.205116364240755,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.203909198930495,0.394636641377094,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0,0,1.41095188908457,0,0,0,0,0,0.509781344063451,0.187967835959707,0.0644578879735772,0.499705779624645,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0.18378979906969,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | ||
|short_description=p9@ARSB | |||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p9@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARSB_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 14bp_to_ENST00000264914_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | P15848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.42e-14 | 3 |
hepatocyte | 7.25e-14 | 12 |
preadipocyte | 1.94e-13 | 12 |
perirenal preadipocyte | 2.68e-11 | 1 |
GAG secreting cell | 1.53e-10 | 9 |
carbohydrate secreting cell | 1.53e-10 | 9 |
chondroblast | 1.17e-07 | 6 |
chondrocyte | 1.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.78e-11 | 1 |
paranasal sinus | 1.78e-11 | 1 |
epithelial sac | 3.95e-10 | 25 |
sac | 9.82e-10 | 26 |
breast | 1.18e-09 | 10 |
liver | 7.94e-09 | 19 |
digestive gland | 7.94e-09 | 19 |
liver bud | 7.94e-09 | 19 |
chest | 7.99e-09 | 11 |
hepatic diverticulum | 1.21e-07 | 22 |
liver primordium | 1.21e-07 | 22 |
digestive tract diverticulum | 2.58e-07 | 23 |
epithelium of foregut-midgut junction | 9.69e-07 | 25 |
anatomical boundary | 9.69e-07 | 25 |
hepatobiliary system | 9.69e-07 | 25 |
foregut-midgut junction | 9.69e-07 | 25 |
septum transversum | 9.69e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.78e-11 | 1 |
maxillary sinus cancer | 1.78e-11 | 1 |