FFCP PHASE1:Hg19::chr5:78281603..78281617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=411 | |EntrezGene=411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |HGNC=714 | ||
|TSSclassifier=strong | |||
|UniProt=P15848 | |UniProt=P15848 | ||
|association_with_transcript=0bp_to_ENST00000264914_5end | |association_with_transcript=0bp_to_ENST00000264914_5end | ||
|cluster_id=chr5:78281603..78281617,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_4_at_ARSB_5end | |description=CAGE_peak_4_at_ARSB_5end | ||
|id=chr5:78281603..78281617,- | |id=chr5:78281603..78281617,- | ||
|ontology_enrichment_celltype=CL:0002334!2.92e-07!12 | |ontology_enrichment_celltype=CL:0002334!2.92e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.36e-24;12!CL:0002579;1.30e-14;3!CL:0002334;1.00e-13;12!CL:0002580;1.67e-07;3!CL:0002615;3.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.38e-24,12;CL:0002579,1.21e-14,3;CL:0002334,8.66e-14,12;CL:0000223,9.78e-08,58;CL:0002580,1.62e-07,3;CL:0002615,3.66e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.05e-20;11!UBERON:0009497;5.56e-17;13!UBERON:0003104;1.51e-10;31!UBERON:0001041;6.90e-09;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!2.98e-07!61;UBERON:0000916!2.98e-07!61 | |ontology_enrichment_uberon=UBERON:0002417!2.98e-07!61;UBERON:0000916!2.98e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.41e-19;6!UBERON:0002358;2.41e-19;6!UBERON:0003684;2.41e-19;6!UBERON:0001178;2.41e-19;6!UBERON:0002107;1.14e-18;19!UBERON:0006925;1.14e-18;19!UBERON:0004457;2.74e-18;9!UBERON:0000042;2.74e-18;9!UBERON:0002423;8.49e-14;25!UBERON:0002365;1.62e-10;31!UBERON:0002330;1.62e-10;31!UBERON:0002417;2.91e-10;58!UBERON:0000916;2.91e-10;58!UBERON:0002368;8.16e-09;33!UBERON:0005172;3.62e-07;52!UBERON:0005173;3.62e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.52e-19,6;UBERON:0002358,2.52e-19,6;UBERON:0003684,2.52e-19,6;UBERON:0001178,2.52e-19,6;UBERON:0002107,1.08e-18,19;UBERON:0006925,1.08e-18,19;UBERON:0008836,1.08e-18,19;UBERON:0002417,1.59e-18,60;UBERON:0000916,1.59e-18,60;UBERON:0004457,2.99e-18,12;UBERON:0000042,2.99e-18,12;UBERON:0007499,3.77e-17,25;UBERON:0009856,2.05e-16,26;UBERON:0008835,6.41e-16,22;UBERON:0003894,6.41e-16,22;UBERON:0009854,3.72e-15,23;UBERON:0009569,3.94e-15,112;UBERON:0009497,8.19e-14,25;UBERON:0000015,8.19e-14,25;UBERON:0002423,8.19e-14,25;UBERON:0006235,8.19e-14,25;UBERON:0004161,8.19e-14,25;UBERON:0002365,7.95e-11,31;UBERON:0002330,7.95e-11,31;UBERON:0005172,5.76e-10,54;UBERON:0005173,5.76e-10,54;UBERON:0002100,7.78e-10,199;UBERON:0002368,2.09e-09,35;UBERON:0003929,2.18e-08,54;UBERON:0000949,5.74e-07,45 | |||
|phase1_expression=7.99384868790449,0.856402095563933,1.40954404095971,7.00513088471913,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0.382067028739756,0.656804715599566,0.629686250509434,0,0,0,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.973269740605272,0.283604451492204,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,1.14734648299525,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,0,0,0,0,0,0.339121184620975,0,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,2.53510069643662,0,4.13552934676983,0,2.82873408649161,0.343135620597051,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0.788123040807709,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,5.45837177201309,5.83155498494637,0.561320188866147,3.07533958213682,1.53512174720011,2.57366273829772,2.96836132889982,0.154209693802656,0,0.246381468041427,0,0.348631135379878,1.81289174387433,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0,0,0,0.37064843820784,1.28812398067792,0,0,0.190630193923825,0,0,0,0,0,0,0,0.606547444719948,0,0,0,1.70599442741899,0,0,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0,0,3.79993743535795,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.534120355637366,0,0,0.185803175125719,0,0,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,2.50634477090067,0,0.642352300414798,0.80719882876419,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,5.11445064251544,0,0,0,0,0,0,0.988823245360557,0,0,0.276283915531148,0.503865495708552,0.511343412510774,0.123084805461069,0,0,0.358042349351218,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0,0,0.296521128680622,0.617819694732514,0.417687798021821,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,3.49487848582361,32.9313702044195,30.9883627513186,31.4774549799043,1.37798474120648,0.0846733320657845,0,0,0.160753148465019,0.412618309791701,0,2.0247650239635,0,0,0,1.65491985328316,1.46872846777995,0.105600336519406,0,0,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0,0.113312091520126,1.61207457045891,0,0.258565912723101,0,0.171086837884329,0,0,0,0.414239055347196,0,0.592834895693833,0.121792598380896,0,0,0,0,0,2.35581144375351,0,0,0,0,0,0.248385611765534,0.138348634936231,0,0.606596470166591,0.285465333544967,0.235265819698172,0,0.579684114443301,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.295710299979268,0.796483835818512,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0.107410557042488,0,0,0.800055529326307,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0.389720617678777,0.398594520940089,0.163565394255844,0,0.737318726261158,0,1.9998739585493,0.853533837553127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0.781514011233092,0.261906694481422,0,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| ||
|short_description=p4@ARSB | |short_description=p4@ARSB | ||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p4@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARSB_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000264914_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | P15848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.38e-24 | 12 |
omentum preadipocyte | 1.21e-14 | 3 |
preadipocyte | 8.66e-14 | 12 |
endodermal cell | 9.78e-08 | 58 |
preadipocyte of the breast | 1.62e-07 | 3 |
adipocyte of omentum tissue | 3.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.52e-19 | 6 |
peritoneum | 2.52e-19 | 6 |
abdominal cavity | 2.52e-19 | 6 |
visceral peritoneum | 2.52e-19 | 6 |
liver | 1.08e-18 | 19 |
digestive gland | 1.08e-18 | 19 |
liver bud | 1.08e-18 | 19 |
abdominal segment of trunk | 1.59e-18 | 60 |
abdomen | 1.59e-18 | 60 |
cavity lining | 2.99e-18 | 12 |
serous membrane | 2.99e-18 | 12 |
epithelial sac | 3.77e-17 | 25 |
sac | 2.05e-16 | 26 |
hepatic diverticulum | 6.41e-16 | 22 |
liver primordium | 6.41e-16 | 22 |
digestive tract diverticulum | 3.72e-15 | 23 |
subdivision of trunk | 3.94e-15 | 112 |
epithelium of foregut-midgut junction | 8.19e-14 | 25 |
anatomical boundary | 8.19e-14 | 25 |
hepatobiliary system | 8.19e-14 | 25 |
foregut-midgut junction | 8.19e-14 | 25 |
septum transversum | 8.19e-14 | 25 |
exocrine gland | 7.95e-11 | 31 |
exocrine system | 7.95e-11 | 31 |
abdomen element | 5.76e-10 | 54 |
abdominal segment element | 5.76e-10 | 54 |
trunk | 7.78e-10 | 199 |
endocrine gland | 2.09e-09 | 35 |
gut epithelium | 2.18e-08 | 54 |
endocrine system | 5.74e-07 | 45 |