FFCP PHASE1:Hg19::chr1:64058939..64058965,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:64058939..64058965,+
|short_description=p2@PGM1
|description=CAGE_peak_2_at_PGM1_5end
|association_with_transcript=0bp_to_ENST00000371084,NM_002633,uc001db...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5236 | |EntrezGene=5236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8905 | |HGNC=8905 | ||
|TSSclassifier=strong | |||
|UniProt=P36871 | |UniProt=P36871 | ||
|association_with_transcript=0bp_to_ENST00000371084,NM_002633,uc001dbh.2_5end | |||
|cluster_id=chr1:64058939..64058965,+ | |||
|coexpression_cluster_id=C3992 | |||
|description=CAGE_peak_2_at_PGM1_5end | |||
|id=chr1:64058939..64058965,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.72e-08!15;CL:0000066!6.84e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.36e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.36e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.05e-12!216;UBERON:0000466!2.18e-12!126;UBERON:0003104!2.45e-12!238;UBERON:0009142!2.45e-12!238;UBERON:0004119!1.23e-10!169;UBERON:0000925!1.23e-10!169;UBERON:0006595!1.23e-10!169;UBERON:0000464!3.49e-09!104;UBERON:0005256!5.87e-09!143;UBERON:0001007!8.03e-09!155;UBERON:0001555!8.03e-09!155;UBERON:0007026!8.03e-09!155;UBERON:0001048!9.47e-09!168;UBERON:0009569!9.96e-09!113;UBERON:0004921!1.82e-08!129;UBERON:0004185!1.82e-08!129;UBERON:0000481!6.08e-08!347;UBERON:0000077!4.98e-07!130;UBERON:0000475!6.48e-07!365;UBERON:0001041!9.63e-07!98 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.13e-13,199;UBERON:0004119,1.85e-10,160;UBERON:0000925,1.85e-10,160;UBERON:0006595,1.85e-10,160;UBERON:0003104,4.34e-10,160;UBERON:0009142,4.34e-10,160;UBERON:0005256,4.86e-09,122;UBERON:0009569,1.23e-08,112;UBERON:0001048,1.48e-08,160;UBERON:0001007,2.45e-08,145;UBERON:0001555,2.45e-08,145;UBERON:0007026,2.45e-08,145;UBERON:0004921,4.15e-08,118 | |||
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| ||
|short_description=p2@PGM1 | |||
}} | }} |
Latest revision as of 20:56, 18 September 2015
Short description: | p2@PGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGM1_5end |
Coexpression cluster: | C3992_skeletal_Preadipocyte_mature_Adipocyte_Cardiac_heart_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000371084, NM_002633, uc001dbh.2_5end |
EntrezGene: | PGM1 |
HGNC: | 8905 |
UniProt: | P36871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.36e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.13e-13 | 199 |
endoderm-derived structure | 1.85e-10 | 160 |
endoderm | 1.85e-10 | 160 |
presumptive endoderm | 1.85e-10 | 160 |
mesenchyme | 4.34e-10 | 160 |
entire embryonic mesenchyme | 4.34e-10 | 160 |
trunk mesenchyme | 4.86e-09 | 122 |
subdivision of trunk | 1.23e-08 | 112 |
primordium | 1.48e-08 | 160 |
digestive system | 2.45e-08 | 145 |
digestive tract | 2.45e-08 | 145 |
primitive gut | 2.45e-08 | 145 |
subdivision of digestive tract | 4.15e-08 | 118 |