FFCP PHASE1:Hg19::chr14:106329516..106329525,-: Difference between revisions
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|id=chr14:106329516..106329525,-
|short_description=p2@IGHJ6
|description=CAGE_peak_2_at_IGHJ6_5end
|association_with_transcript=-48bp_to_ENST00000390560_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5540 | |HGNC=5540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000390560_5end | |||
|cluster_id=chr14:106329516..106329525,- | |||
|coexpression_cluster_id=C2087 | |||
|description=CAGE_peak_2_at_IGHJ6_5end | |||
|id=chr14:106329516..106329525,- | |||
|ontology_enrichment_celltype=CL:0000945!3.96e-86!24;CL:0000826!3.96e-86!24;CL:0000236!3.55e-45!14;CL:0000542!1.53e-40!53;CL:0000051!1.53e-40!53;CL:0000838!2.44e-37!52;CL:0002087!5.84e-17!119;CL:0000037!7.11e-17!172;CL:0000566!7.11e-17!172;CL:0000988!1.23e-15!182;CL:0002032!7.44e-15!165;CL:0000837!7.44e-15!165;CL:0000738!1.04e-13!140;CL:0002031!6.38e-13!124;CL:0000817!5.64e-08!3;CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.83e-74;24!CL:0000236;1.70e-34;13!CL:0000542;2.00e-20;53!CL:0000946;2.71e-19;1!CL:0000786;2.71e-19;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.02e-74,24;CL:0000826,5.02e-74,24;CL:0000236,6.84e-46,14;CL:0000838,5.50e-34,52;CL:0000542,2.45e-33,53;CL:0000051,2.45e-33,53;CL:0000946,4.69e-19,1;CL:0000786,4.69e-19,1;CL:0000980,4.69e-19,1;CL:0002087,6.05e-15,115;CL:0002031,2.66e-14,120;CL:0000738,1.48e-12,136;CL:0002032,1.64e-10,161;CL:0000837,1.64e-10,161;CL:0000785,3.27e-10,2;CL:0000955,3.27e-10,2;CL:0000818,3.27e-10,2;CL:0000954,3.27e-10,2;CL:0000816,3.27e-10,2;CL:0000037,4.80e-10,168;CL:0000988,1.68e-09,177;CL:0000817,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.00e-20;53!CL:0000954;2.48e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!2.97e-10!51;DOID:0060083!2.97e-10!51;DOID:0060058!2.09e-08!10;DOID:4960!4.09e-07!1;DOID:0070004!4.09e-07!1;DOID:12603!8.97e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;9.81e-20;1!DOID:0070004;9.81e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.95e-20,1;DOID:0070004,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.15e-16!3;UBERON:0004854!5.15e-16!3;UBERON:0009034!5.15e-16!3;UBERON:0002095!5.15e-16!3;UBERON:0004782!5.15e-16!3;UBERON:0003281!5.15e-16!3;UBERON:0009664!5.15e-16!3;UBERON:0002296!5.15e-16!3;UBERON:0005602!5.15e-16!3;UBERON:0001179!5.15e-16!3;UBERON:0006293!5.15e-16!3;UBERON:0004177!7.91e-12!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@IGHJ6 | |||
}} | }} |
Latest revision as of 21:11, 18 September 2015
Short description: | p2@IGHJ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGHJ6_5end |
Coexpression cluster: | C2087_myeloma_plasma_b_acute_B_CD19_splenic |
Association with transcript: | -48bp_to_ENST00000390560_5end |
EntrezGene: | NA |
HGNC: | 5540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.02e-74 | 24 |
pro-B cell | 5.02e-74 | 24 |
B cell | 6.84e-46 | 14 |
lymphoid lineage restricted progenitor cell | 5.50e-34 | 52 |
lymphocyte | 2.45e-33 | 53 |
common lymphoid progenitor | 2.45e-33 | 53 |
antibody secreting cell | 4.69e-19 | 1 |
plasma cell | 4.69e-19 | 1 |
plasmablast | 4.69e-19 | 1 |
nongranular leukocyte | 6.05e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.66e-14 | 120 |
leukocyte | 1.48e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-10 | 161 |
mature B cell | 3.27e-10 | 2 |
pre-B-II cell | 3.27e-10 | 2 |
transitional stage B cell | 3.27e-10 | 2 |
small pre-B-II cell | 3.27e-10 | 2 |
immature B cell | 3.27e-10 | 2 |
hematopoietic stem cell | 4.80e-10 | 168 |
hematopoietic cell | 1.68e-09 | 177 |
precursor B cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |