FFCP PHASE1:Hg19::chr11:625163..625174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53841 | |EntrezGene=53841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7521 | |HGNC=7521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000349570,ENST00000529337,uc001lql.2_5end | |association_with_transcript=0bp_to_ENST00000349570,ENST00000529337,uc001lql.2_5end | ||
|cluster_id=chr11:625163..625174,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_7_at_CDHR5_5end | |description=CAGE_peak_7_at_CDHR5_5end | ||
|id=chr11:625163..625174,- | |id=chr11:625163..625174,- | ||
|ontology_enrichment_celltype=CL:0002563!1.62e-13!4;CL:0002253!1.75e-07!2 | |ontology_enrichment_celltype=CL:0002563!1.62e-13!4;CL:0002253!1.75e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.83e-14;3!CL:0002563;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.09e-14,3;CL:0002563,3.10e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!9.87e-08!2;DOID:4929!1.64e-07!2 | |ontology_enrichment_disease=DOID:3493!9.87e-08!2;DOID:4929!1.64e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.44e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.81e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!7.35e-28!27;UBERON:0005409!1.63e-21!35;UBERON:0004913!9.73e-14!1;UBERON:0003703!9.73e-14!1;UBERON:0001174!9.73e-14!1;UBERON:0004914!9.73e-14!1;UBERON:0002108!1.01e-13!14;UBERON:0001242!1.62e-13!4;UBERON:0001262!1.62e-13!4;UBERON:0004786!1.62e-13!4;UBERON:0004808!1.62e-13!4;UBERON:0001277!1.62e-13!4;UBERON:0001052!1.95e-13!4;UBERON:0003350!5.29e-11!5;UBERON:0004907!6.15e-11!5;UBERON:0000059!7.99e-11!11;UBERON:0004921!1.96e-08!129;UBERON:0004185!1.96e-08!129;UBERON:0001007!8.20e-07!155;UBERON:0001555!8.20e-07!155;UBERON:0007026!8.20e-07!155 | |ontology_enrichment_uberon=UBERON:0000160!7.35e-28!27;UBERON:0005409!1.63e-21!35;UBERON:0004913!9.73e-14!1;UBERON:0003703!9.73e-14!1;UBERON:0001174!9.73e-14!1;UBERON:0004914!9.73e-14!1;UBERON:0002108!1.01e-13!14;UBERON:0001242!1.62e-13!4;UBERON:0001262!1.62e-13!4;UBERON:0004786!1.62e-13!4;UBERON:0004808!1.62e-13!4;UBERON:0001277!1.62e-13!4;UBERON:0001052!1.95e-13!4;UBERON:0003350!5.29e-11!5;UBERON:0004907!6.15e-11!5;UBERON:0000059!7.99e-11!11;UBERON:0004921!1.96e-08!129;UBERON:0004185!1.96e-08!129;UBERON:0001007!8.20e-07!155;UBERON:0001555!8.20e-07!155;UBERON:0007026!8.20e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.57e-32;4!UBERON:0000160;1.52e-20;17!UBERON:0005409;2.78e-16;22!UBERON:0002114;1.83e-14;2!UBERON:0001242;3.42e-11;4!UBERON:0001262;3.42e-11;4!UBERON:0004786;3.42e-11;4!UBERON:0004808;3.42e-11;4!UBERON:0001277;3.42e-11;4!UBERON:0004921;1.74e-09;33!UBERON:0000485;6.04e-07;7!UBERON:0003929;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.44e-32,4;UBERON:0000160,1.37e-20,17;UBERON:0005409,1.55e-14,25;UBERON:0002114,1.83e-14,2;UBERON:0001242,3.10e-11,4;UBERON:0001262,3.10e-11,4;UBERON:0004786,3.10e-11,4;UBERON:0004808,3.10e-11,4;UBERON:0001277,3.10e-11,4 | |||
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|short_description=p7@CDHR5 | |short_description=p7@CDHR5 | ||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p7@CDHR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDHR5_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000349570, ENST00000529337, uc001lql.2_5end |
EntrezGene: | CDHR5 |
HGNC: | 7521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.09e-14 | 3 |
intestinal epithelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.44e-32 | 4 |
intestine | 1.37e-20 | 17 |
gastrointestinal system | 1.55e-14 | 25 |
duodenum | 1.83e-14 | 2 |
intestinal mucosa | 3.10e-11 | 4 |
wall of intestine | 3.10e-11 | 4 |
gastrointestinal system mucosa | 3.10e-11 | 4 |
gastrointestinal system epithelium | 3.10e-11 | 4 |
intestinal epithelium | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.81e-21 | 2 |