FFCP PHASE1:Hg19::chr2:89157161..89157206,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5716 | |HGNC=5716 | ||
|TSSclassifier=strong | |||
|UniProt=P01834 | |UniProt=P01834 | ||
|association_with_transcript=0bp_to_ENST00000390237_5end | |association_with_transcript=0bp_to_ENST00000390237_5end | ||
|cluster_id=chr2:89157161..89157206,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_1_at_IGKC_5end | |description=CAGE_peak_1_at_IGKC_5end | ||
|id=chr2:89157161..89157206,- | |id=chr2:89157161..89157206,- | ||
|ontology_enrichment_celltype=CL:0000236!3.13e-27!14;CL:0000945!9.45e-25!24;CL:0000826!9.45e-25!24;CL:0000838!1.73e-12!52;CL:0000542!3.77e-12!53;CL:0000051!3.77e-12!53;CL:0002087!4.26e-07!119;CL:0000784!9.05e-07!3 | |ontology_enrichment_celltype=CL:0000236!3.13e-27!14;CL:0000945!9.45e-25!24;CL:0000826!9.45e-25!24;CL:0000838!1.73e-12!52;CL:0000542!3.77e-12!53;CL:0000051!3.77e-12!53;CL:0002087!4.26e-07!119;CL:0000784!9.05e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.73e-34;13!CL:0000945;6.26e-31;24!CL:0000542;1.51e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.61e-37,14;CL:0000945,5.89e-31,24;CL:0000826,5.89e-31,24;CL:0000838,1.16e-13,52;CL:0000542,2.52e-13,53;CL:0000051,2.52e-13,53;CL:0002087,1.66e-07,115;CL:0000785,1.77e-07,2;CL:0000955,1.77e-07,2;CL:0000818,1.77e-07,2;CL:0000954,1.77e-07,2;CL:0000816,1.77e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-10;53!UBERON:0004872;1.81e-07;7!UBERON:0006965;1.86e-07;2!CL:0000954;1.89e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.91e-07!10 | |ontology_enrichment_disease=DOID:0060058!2.91e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-43!115;UBERON:0000178!5.63e-12!15;UBERON:0000179!5.63e-12!15;UBERON:0000463!5.63e-12!15 | |ontology_enrichment_uberon=UBERON:0007023!1.70e-43!115;UBERON:0000178!5.63e-12!15;UBERON:0000179!5.63e-12!15;UBERON:0000463!5.63e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.46e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.14e-28,114;UBERON:0001829,1.46e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17615522379237,2.84338464974843,0,0,0,0,0.671746422719773,8.74512898251245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,33.4392864476513,25.122376118058,28.4642961236338,17.9226693477933,29.6293030406649,28.7376219977242,35.0353782575977,25.7594513724548,10.2458334439701,15.2681669236444,12.2327433000073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91413608338813,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,1.52234282769651,0.764637207142375,2.84823593587081,1.19115887728894,1.64544909234478,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.222886768554957,0,0,0,0,0,0,0,0,0,4.98119970627674,40.0611677520164,0,0,0,0,0,0,0,21.5042624288515,11.974154617347,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1588475646987,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,54.7552324275669,0,0,0,0,0,0,0,10.94728735294,0,0,0,0,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,19.3978032976839,0,0,0,0,0,0,0,20.9183934844566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,5.27998238904628,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0,0,0,0,21.7846321638097,0,13.2556497711103,80.378895533536,88.530011090279,17.9035119619917,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1058891937792,0,1.56302802246618,0,0,0,0,0,0,0.0634158101939068,0,10.4168975702865,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,21.8944576355981,0,0,0,0,0,0.863424021355654,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,12.0463660469678,0,0,16.0887079072553,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,49.1599387147607,0,0,0,0,0,0,0,0,54.1347367563957,1.03132620757723,0,0,0,0,0,30.7348619881042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69967337193464,0.535928260312357,0,0.103432995861895,17.2719525339795,0,3.42321222130832,0.372448285775147,0,0.954707374172474,0,8.49095316798149,0,22.8323459719452,18.1457179643471,0,0,0,0,0,0,0.366724332548599,0,0,31.8012593873821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17615522379237,2.84338464974843,0,0,0,0,0.671746422719773,8.74512898251245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,33.4392864476513,25.122376118058,28.4642961236338,17.9226693477933,29.6293030406649,28.7376219977242,35.0353782575977,25.7594513724548,10.2458334439701,15.2681669236444,12.2327433000073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91413608338813,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,1.52234282769651,0.764637207142375,2.84823593587081,1.19115887728894,1.64544909234478,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.222886768554957,0,0,0,0,0,0,0,0,0,4.98119970627674,40.0611677520164,0,0,0,0,0,0,0,21.5042624288515,11.974154617347,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1588475646987,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,54.7552324275669,0,0,0,0,0,0,0,10.94728735294,0,0,0,0,0,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,19.3978032976839,0,0,0,0,0,0,0,20.9183934844566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,5.27998238904628,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,3.81035807563014,0,0,0,0,0,21.7846321638097,0,13.2556497711103,80.378895533536,88.530011090279,17.9035119619917,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1058891937792,0,1.56302802246618,0,0,0,0,0,0,0.0634158101939068,0,10.4168975702865,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,21.8944576355981,0,0,0,0,0,0.863424021355654,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,12.0463660469678,0,0,16.0887079072553,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,49.1599387147607,0,0,0,0,0,0,0,0,54.1347367563957,1.03132620757723,0,0,0,0,0,30.7348619881042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69967337193464,0.535928260312357,0,0.103432995861895,17.2719525339795,0,3.42321222130832,0.372448285775147,0,0.954707374172474,0,8.49095316798149,0,22.8323459719452,18.1457179643471,0,0,0,0,0,0,0.366724332548599,0,0,31.8012593873821,0 | ||
|short_description=p1@IGKC | |short_description=p1@IGKC | ||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p1@IGKC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGKC_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 0bp_to_ENST00000390237_5end |
EntrezGene: | NA |
HGNC: | 5716 |
UniProt: | P01834 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.61e-37 | 14 |
lymphocyte of B lineage | 5.89e-31 | 24 |
pro-B cell | 5.89e-31 | 24 |
lymphoid lineage restricted progenitor cell | 1.16e-13 | 52 |
lymphocyte | 2.52e-13 | 53 |
common lymphoid progenitor | 2.52e-13 | 53 |
nongranular leukocyte | 1.66e-07 | 115 |
mature B cell | 1.77e-07 | 2 |
pre-B-II cell | 1.77e-07 | 2 |
transitional stage B cell | 1.77e-07 | 2 |
small pre-B-II cell | 1.77e-07 | 2 |
immature B cell | 1.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.14e-28 | 114 |
major salivary gland | 1.46e-07 | 2 |