FFCP PHASE1:Hg19::chr19:47220285..47220334,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25865 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17293 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZL6 | |||
|association_with_transcript=49bp_to_ENST00000291281,ENST00000433867,NM_001079880,NM_001079881,NM_016457,uc002pfh.2,uc002pfi.2,uc002pfj.2,uc002pfk.2,uc010xye.1_5end | |||
|cluster_id=chr19:47220285..47220334,- | |||
|description=CAGE_peak_4_at_PRKD2_5end | |||
|id=chr19:47220285..47220334,- | |||
|ontology_enrichment_celltype=CL:0000115!1.72e-15!35;CL:0002078!8.02e-15!44;CL:0002139!1.78e-14!24;CL:0000071!2.23e-11!18;CL:0002546!2.23e-11!18;CL:0000542!3.50e-09!53;CL:0000051!3.50e-09!53;CL:0000838!4.27e-09!52;CL:0000213!3.89e-08!57;CL:0000215!3.89e-08!57;CL:0000945!1.23e-07!24;CL:0000826!1.23e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.53e-20;24!CL:0000115;1.44e-17;36!CL:0000071;5.15e-16;18!CL:0002078;1.63e-11;45!CL:0000945;4.53e-11;24!CL:1000413;1.31e-08;9!CL:0000213;2.26e-08;58!CL:0000215;2.26e-08;58!CL:0000236;2.80e-08;13!CL:0000094;8.03e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.35e-21,36;CL:0002139,1.82e-20,24;CL:0002078,2.92e-18,45;CL:0000071,6.28e-16,18;CL:0002546,6.28e-16,18;CL:0000213,1.76e-12,58;CL:0000215,1.76e-12,58;CL:0000945,6.67e-11,24;CL:0000826,6.67e-11,24;CL:0000838,1.50e-10,52;CL:0000542,3.88e-10,53;CL:0000051,3.88e-10,53;CL:1000413,1.76e-08,9;CL:0000236,2.51e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002546;5.15e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.23e-11!18;UBERON:0004638!2.23e-11!18;UBERON:0004852!2.23e-11!18;UBERON:0000487!2.85e-09!22;UBERON:0006914!6.14e-09!25;UBERON:0000055!1.67e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.15e-16;18!UBERON:0001986;5.15e-16;18!UBERON:0004852;5.15e-16;18!UBERON:0000487;1.00e-11;22!UBERON:0006914;1.79e-10;25!UBERON:0003915;1.31e-08;9!UBERON:0004700;1.31e-08;9!UBERON:0001917;1.31e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.28e-16,18;UBERON:0001986,6.28e-16,18;UBERON:0004852,6.28e-16,18;UBERON:0000487,1.15e-11,22;UBERON:0006914,1.78e-10,25;UBERON:0003915,1.76e-08,9;UBERON:0004700,1.76e-08,9;UBERON:0001917,1.76e-08,9;UBERON:0000055,4.60e-08,68 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0.783556884599516,0.982935746006035,2.79120467188971,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.861847406537515,0,0.313454721478088,0.286235987131057,1.23186982565596,0.251085279189606,4.35556412763322,6.15754420874593,4.95877922276179,1.18009283054671,1.15148819429164,1.23852898652861,0.919421224478927,0.6024118375565,1.10926203050036,1.62681121218633,0.995184627411951,0.293600439334847,0,0.601633342410425,0.217010870715852,0,0.647787332037959,0.77272670290256,0.436194716338694,0.377875943688809,0.727752183563449,0.697287110717054,0.822335776043652,1.23882548358041,0,0,0,0,0.645484683583826,0,0.188242339542605,1.36453075028923,0.224723484445085,0,0.641858054152187,0.639337125799041,0,0,0.426224750532694,0.290209238628584,1.13477044938228,0,0.502497330513487,2.08593167368081,0,1.21079900526674,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,6.55366333514558,3.55803701545422,6.82768356106412,5.60554381850417,2.29900975981793,5.2883589822789,4.77026877267682,10.8150464130795,8.22132065119314,6.49864487812889,0,0.560508562981536,1.31692042387539,1.37696839079683,1.57204305099666,1.43921049299656,1.5046784585161,0.32592226663359,0.946895611469467,0,2.00538822393312,1.17842362989935,1.99380505125259,1.08321545506006,3.33037431286755,1.8208308658383,2.13769275984779,1.93445012450094,2.02862160014537,1.18629250529648,1.07016331235885,2.09071047609954,2.94604291013672,1.91610246800961,1.03088233644789,1.01207876807801,1.59282707162048,0,0.950452044448374,1.95747654801105,1.15187950038977,0,1.89421801635213,1.64225599384209,1.00803371612366,1.33720097891754,1.88271725047639,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.472674085820339,0.221729397462564,0.527008714158756,1.11332214173056,1.45718115317017,1.11235332835329,0,0.174129737299267,0.26591592103773,0,0,0,2.38514888840046,3.4409383804245,6.59566953054429,6.21838736116411,4.19499436209906,3.30141650328081,3.76190939766259,5.16833518338658,7.1153252537342,10.3763389957048,4.83395180530976,3.04108842287405,12.935289050053,2.20597848207521,3.24056779152704,3.57198913136319,4.26605807989723,4.95490514126618,4.5994991239765,2.84779697870439,4.58004359826018,3.9534125230819,3.87780264148325,0.436094052142534,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.808264032418128,0.817309515567294,0.454072282934794,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0.352303495931295,0.485618833104395,0.280901613404497,0.204154171254893,0.859840221182376,0.413303124703062,0,0.741800787835671,0,0,0.168336113954066,0.375355559615893,0,0.877955241761676,0.30648779579902,0.901428353439581,0.226864366320042,0,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0,0.18611685633159,0.675105328965065,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0.339121184620975,0.386521706326594,0.818238361772504,0.860413786167011,1.95157929807353,1.85541675650079,1.2781333715647,1.0366105501537,0.252320850875628,2.55484151353081,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.71181185733329,0.134831308160164,0.392442930250692,0,11.8104872739944,9.81692416624121,0.4115740113314,0,1.26755034821831,1.96565443335525,1.18157981336281,0.882926198829301,1.10689594688802,0.514703430895577,1.86575485194663,0,0.603173834469785,0.462942225792648,0,1.03993478527958,0,0.231860809950154,0.469634776943287,2.7429625074604,2.31492756288305,1.90254152234598,1.58040879591855,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0.671928512795438,0.708875486211932,0.626909658919938,1.16253575405585,1.15014803749563,5.41929561685538,0.792435906119034,3.10992173311158,2.73827911492227,3.53478813593864,0.126995788584338,2.29193055334967,0,0,0.205654985406647,0,0.857479297891735,0,0,0.5867062865676,0.129271715757778,0,2.535908257668,0.26593811658487,0,0.257207374262142,0,1.5985330740966,0.57191197463259,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0,0.560425719967636,1.77327684181734,0.646882724578552,2.69520376187472,1.77866236955724,1.30139853857622,0.773288812777695,0,0.637938751653163,22.4702107184155,23.932916736322,19.0631136180576,0.36807447515742,0.500170521059677,0,0.415941723061614,0.535286966391485,0.157702415033935,0.585707074963566,0.902838299183157,2.27407504055985,0,0,0.737476674166813,0.781952530212746,0.783204629850962,1.37257369524342,1.03384013061444,1.94142780736755,1.06727557803444,0.909382714338778,0,0.30239029332968,0.744323423456331,0.153461973288062,0.280660094433074,0.128139149255701,0,0.482561763430822,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| |||
|short_description=p4@PRKD2 | |||
}} |
Latest revision as of 21:34, 18 September 2015
Short description: | p4@PRKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000291281, ENST00000433867, NM_001079880, NM_001079881, NM_016457, uc002pfh.2, uc002pfi.2, uc002pfj.2, uc002pfk.2, uc010xye.1_5end |
EntrezGene: | PRKD2 |
HGNC: | 17293 |
UniProt: | Q9BZL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.35e-21 | 36 |
endothelial cell of vascular tree | 1.82e-20 | 24 |
meso-epithelial cell | 2.92e-18 | 45 |
blood vessel endothelial cell | 6.28e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.28e-16 | 18 |
lining cell | 1.76e-12 | 58 |
barrier cell | 1.76e-12 | 58 |
lymphocyte of B lineage | 6.67e-11 | 24 |
pro-B cell | 6.67e-11 | 24 |
lymphoid lineage restricted progenitor cell | 1.50e-10 | 52 |
lymphocyte | 3.88e-10 | 53 |
common lymphoid progenitor | 3.88e-10 | 53 |
endothelial cell of artery | 1.76e-08 | 9 |
B cell | 2.51e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.28e-16 | 18 |
endothelium | 6.28e-16 | 18 |
cardiovascular system endothelium | 6.28e-16 | 18 |
simple squamous epithelium | 1.15e-11 | 22 |
squamous epithelium | 1.78e-10 | 25 |
endothelial tube | 1.76e-08 | 9 |
arterial system endothelium | 1.76e-08 | 9 |
endothelium of artery | 1.76e-08 | 9 |
vessel | 4.60e-08 | 68 |