FFCP PHASE1:Hg19::chr14:106371329..106371353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3495 | |EntrezGene=3495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5480 | |HGNC=5480 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NF20 | |UniProt=Q8NF20 | ||
|association_with_transcript=49bp_to_AK090461_5end | |association_with_transcript=49bp_to_AK090461_5end | ||
|cluster_id=chr14:106371329..106371353,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_1_at_IGHD_5end | |description=CAGE_peak_1_at_IGHD_5end | ||
|id=chr14:106371329..106371353,- | |id=chr14:106371329..106371353,- | ||
|ontology_enrichment_celltype=CL:0000236!1.72e-32!14;CL:0000945!6.97e-25!24;CL:0000826!6.97e-25!24;CL:0000838!8.11e-10!52;CL:0000542!1.41e-09!53;CL:0000051!1.41e-09!53;CL:0002087!7.63e-07!119 | |ontology_enrichment_celltype=CL:0000236!1.72e-32!14;CL:0000945!6.97e-25!24;CL:0000826!6.97e-25!24;CL:0000838!8.11e-10!52;CL:0000542!1.41e-09!53;CL:0000051!1.41e-09!53;CL:0002087!7.63e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.80e-84;13!CL:0000945;1.59e-53;24!CL:0000542;7.98e-18;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.61e-78,14;CL:0000945,1.55e-53,24;CL:0000826,1.55e-53,24;CL:0000838,1.03e-23,52;CL:0000542,3.14e-23,53;CL:0000051,3.14e-23,53;CL:0002087,1.50e-09,115;CL:0002031,4.49e-09,120;CL:0000738,8.79e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;7.98e-18;53!UBERON:0001045;2.39e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.43e-10;1!DOID:0050177;1.43e-10;1!DOID:0050427;1.43e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.43e-10,1;DOID:0050177,1.43e-10,1;DOID:0050427,1.43e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.61e-23!15;UBERON:0000179!6.61e-23!15;UBERON:0000463!6.61e-23!15;UBERON:0007023!1.41e-20!115;UBERON:0003408!9.28e-09!10;UBERON:0004177!2.17e-08!7;UBERON:0001829!3.25e-08!2;UBERON:0002193!4.19e-08!112;UBERON:0002390!3.41e-07!102;UBERON:0003061!3.41e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!6.61e-23!15;UBERON:0000179!6.61e-23!15;UBERON:0000463!6.61e-23!15;UBERON:0007023!1.41e-20!115;UBERON:0003408!9.28e-09!10;UBERON:0004177!2.17e-08!7;UBERON:0001829!3.25e-08!2;UBERON:0002193!4.19e-08!112;UBERON:0002390!3.41e-07!102;UBERON:0003061!3.41e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-14;15!UBERON:0000179;1.10e-14;15!UBERON:0000463;1.10e-14;15!UBERON:0001154;2.39e-10;1!UBERON:0001153;2.39e-10;1!UBERON:0009854;2.39e-10;1!UBERON:0002372;3.61e-10;1!UBERON:0000029;3.61e-10;1!UBERON:0001961;3.61e-10;1!UBERON:0001744;3.61e-10;1!UBERON:0001042;3.61e-10;1!UBERON:0001735;3.61e-10;1!UBERON:0002390;4.92e-09;32!UBERON:0002193;5.78e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.11e-14,15;UBERON:0000179,1.11e-14,15;UBERON:0000463,1.11e-14,15;UBERON:0001154,2.50e-10,1;UBERON:0001153,2.50e-10,1;UBERON:0001045,2.50e-10,1;UBERON:0000029,2.74e-10,1;UBERON:0002372,3.96e-10,1;UBERON:0001961,3.96e-10,1;UBERON:0001744,3.96e-10,1;UBERON:0001735,3.96e-10,1 | |||
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| ||
|short_description=p1@IGHD | |short_description=p1@IGHD | ||
}} | }} |
Latest revision as of 21:43, 18 September 2015
Short description: | p1@IGHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHD_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 49bp_to_AK090461_5end |
EntrezGene: | IGHD |
HGNC: | 5480 |
UniProt: | Q8NF20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.61e-78 | 14 |
lymphocyte of B lineage | 1.55e-53 | 24 |
pro-B cell | 1.55e-53 | 24 |
lymphoid lineage restricted progenitor cell | 1.03e-23 | 52 |
lymphocyte | 3.14e-23 | 53 |
common lymphoid progenitor | 3.14e-23 | 53 |
nongranular leukocyte | 1.50e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.49e-09 | 120 |
leukocyte | 8.79e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.11e-14 | 15 |
haemolymphatic fluid | 1.11e-14 | 15 |
organism substance | 1.11e-14 | 15 |
vermiform appendix | 2.50e-10 | 1 |
caecum | 2.50e-10 | 1 |
midgut | 2.50e-10 | 1 |
lymph node | 2.74e-10 | 1 |
tonsil | 3.96e-10 | 1 |
mucosa-associated lymphoid tissue | 3.96e-10 | 1 |
lymphoid tissue | 3.96e-10 | 1 |
tonsillar ring | 3.96e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.43e-10 | 1 |
monogenic disease | 1.43e-10 | 1 |
xeroderma pigmentosum | 1.43e-10 | 1 |