FFCP PHASE1:Hg19::chr7:48039832..48039849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256979 | |EntrezGene=256979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22429 | |HGNC=22429 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000473723_5end | |association_with_transcript=-54bp_to_ENST00000473723_5end | ||
|cluster_id=chr7:48039832..48039849,- | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_1_at_SUN3_5end | |description=CAGE_peak_1_at_SUN3_5end | ||
|id=chr7:48039832..48039849,- | |id=chr7:48039832..48039849,- | ||
|ontology_enrichment_celltype=CL:0000039;2.86e-32;7!CL:0000586;2.86e-32;7!CL:1000415;1.29e-13;2 | |ontology_enrichment_celltype=CL:0000039!7.99e-26!7;CL:0000586!7.99e-26!7;CL:0002541!5.17e-15!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;2.86e-32;7!CL:0000586;2.86e-32;7!CL:1000415;1.29e-13;2 | ||
|ontology_enrichment_disease=DOID:6193;3.58e-26;1!DOID:1749;1.11e-16;14!DOID:3350;8.28e-14;2!DOID:3095;8.48e-11;22!DOID:2994;8.48e-11;22!DOID:4556;1.60e-09;3 | |ontology_enrichment_celltype_v019_2=CL:0000039,2.57e-32,7;CL:0000586,2.57e-32,7;CL:1000415,1.07e-13,2 | ||
|ontology_enrichment_uberon=UBERON:0002110;1.60e-09;3!UBERON:0003343;1.31e-07;4!UBERON:0004785;1.31e-07;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.13e-11!239;DOID:0050687!1.14e-11!143;DOID:162!4.92e-11!235;DOID:305!7.17e-11!106;DOID:1749!7.29e-09!14;DOID:3095!8.93e-08!22;DOID:2994!8.93e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.58e-26;1!DOID:1749;1.11e-16;14!DOID:3350;8.28e-14;2!DOID:3095;8.48e-11;22!DOID:2994;8.48e-11;22!DOID:4556;1.60e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.58e-26,1;DOID:1749,1.26e-16,14;DOID:3350,8.28e-14,2;DOID:0050687,4.45e-11,143;DOID:3095,8.20e-11,22;DOID:2994,8.20e-11,22;DOID:4556,1.81e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.17e-15!3;UBERON:0000920!5.17e-15!3;UBERON:0002294!3.11e-11!7;UBERON:0001173!3.11e-11!7;UBERON:0004912!3.11e-11!7;UBERON:0002394!3.47e-11!4;UBERON:0003928!3.47e-11!4;UBERON:0003124!5.59e-11!7;UBERON:0000473!5.40e-10!8;UBERON:0005631!3.01e-08!14;UBERON:0000158!3.01e-08!14;UBERON:0003135!2.78e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.60e-09;3!UBERON:0003343;1.31e-07;4!UBERON:0004785;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0003343,1.31e-07,4;UBERON:0004785,1.31e-07,4 | |||
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|short_description=p1@SUN3 | |short_description=p1@SUN3 | ||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p1@SUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUN3_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | -54bp_to_ENST00000473723_5end |
EntrezGene: | SUN3 |
HGNC: | 22429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.57e-32 | 7 |
germ cell | 2.57e-32 | 7 |
epithelial cell of gall bladder | 1.07e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.41e-09 | 3 |
gall bladder primordium | 1.41e-09 | 3 |
mucosa of oral region | 1.31e-07 | 4 |
respiratory system mucosa | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.58e-26 | 1 |
squamous cell carcinoma | 1.26e-16 | 14 |
mesenchymal cell neoplasm | 8.28e-14 | 2 |
cell type cancer | 4.45e-11 | 143 |
germ cell and embryonal cancer | 8.20e-11 | 22 |
germ cell cancer | 8.20e-11 | 22 |
lung large cell carcinoma | 1.81e-09 | 3 |