FFCP PHASE1:Hg19::chr6:43265992..43266003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10864 | |EntrezGene=10864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10971 | |HGNC=10971 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y694,Q5T051,Q8WWC3 | |UniProt=Q9Y694,Q5T051,Q8WWC3 | ||
|association_with_transcript=0bp_to_ENST00000372585,ENST00000372589,ENST00000449231,ENST00000498232,NM_006672,NM_153320,uc003ous.2,uc003out.2,uc010jyl.1_5end | |association_with_transcript=0bp_to_ENST00000372585,ENST00000372589,ENST00000449231,ENST00000498232,NM_006672,NM_153320,uc003ous.2,uc003out.2,uc010jyl.1_5end | ||
|cluster_id=chr6:43265992..43266003,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SLC22A7_5end | |description=CAGE_peak_4_at_SLC22A7_5end | ||
|id=chr6:43265992..43266003,+ | |id=chr6:43265992..43266003,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.85e-33!12;CL:0000417!4.85e-33!12;CL:0000668!4.85e-33!12;CL:0000414!4.85e-33!12;CL:0000412!4.85e-33!12;CL:0000182!4.85e-33!12;CL:0002322!1.57e-09!5 | |ontology_enrichment_celltype=CL:0000181!4.85e-33!12;CL:0000417!4.85e-33!12;CL:0000668!4.85e-33!12;CL:0000414!4.85e-33!12;CL:0000412!4.85e-33!12;CL:0000182!4.85e-33!12;CL:0002322!1.57e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.75e-10;31!UBERON:0003918;4.58e-08;10!UBERON:0007687;4.58e-08;10!UBERON:0004161;1.64e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.17e-36!19;UBERON:0006925!1.17e-36!19;UBERON:0008836!1.17e-36!19;UBERON:0008835!1.46e-31!22;UBERON:0003894!1.46e-31!22;UBERON:0009854!3.72e-30!23;UBERON:0007499!1.10e-27!25;UBERON:0009497!1.10e-27!25;UBERON:0000015!1.10e-27!25;UBERON:0002423!1.10e-27!25;UBERON:0006235!1.10e-27!25;UBERON:0004161!1.10e-27!25;UBERON:0005057!1.37e-26!26;UBERON:0009856!1.37e-26!26;UBERON:0002365!3.57e-22!31;UBERON:0002330!3.57e-22!31;UBERON:0002368!1.51e-19!35;UBERON:0005172!6.12e-19!55;UBERON:0005173!6.12e-19!55;UBERON:0002417!5.97e-17!61;UBERON:0000916!5.97e-17!61;UBERON:0000949!5.14e-15!45;UBERON:0003929!2.29e-12!54;UBERON:0002146!3.85e-12!1;UBERON:0005623!3.85e-12!1;UBERON:0002530!3.04e-11!59;UBERON:0005177!4.34e-09!107;UBERON:0009569!1.56e-08!113;UBERON:0005911!7.84e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.98e-24;19!UBERON:0006925;4.98e-24;19!UBERON:0002423;2.61e-18;25!UBERON:0002365;9.09e-15;31!UBERON:0002330;9.09e-15;31!UBERON:0002368;8.40e-13;33!UBERON:0005172;2.58e-12;52!UBERON:0005173;2.58e-12;52!UBERON:0000949;2.32e-09;43!UBERON:0002417;1.86e-08;58!UBERON:0000916;1.86e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.86e-24,19;UBERON:0006925,4.86e-24,19;UBERON:0008836,4.86e-24,19;UBERON:0008835,8.62e-21,22;UBERON:0003894,8.62e-21,22;UBERON:0009854,6.78e-20,23;UBERON:0007499,2.56e-18,25;UBERON:0009497,2.56e-18,25;UBERON:0000015,2.56e-18,25;UBERON:0002423,2.56e-18,25;UBERON:0006235,2.56e-18,25;UBERON:0004161,2.56e-18,25;UBERON:0009856,1.28e-17,26;UBERON:0005172,4.21e-16,54;UBERON:0005173,4.21e-16,54;UBERON:0002365,8.40e-15,31;UBERON:0002330,8.40e-15,31;UBERON:0002417,1.83e-14,60;UBERON:0000916,1.83e-14,60;UBERON:0002368,4.01e-13,35;UBERON:0000949,3.18e-10,45;UBERON:0003929,1.58e-08,54;UBERON:0005177,1.88e-08,101;UBERON:0002530,8.35e-08,59;UBERON:0009569,1.39e-07,112 | |||
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|short_description=p4@SLC22A7 | |short_description=p4@SLC22A7 | ||
}} | }} |
Latest revision as of 21:52, 18 September 2015
Short description: | p4@SLC22A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC22A7_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000372585, ENST00000372589, ENST00000449231, ENST00000498232, NM_006672, NM_153320, uc003ous.2, uc003out.2, uc010jyl.1_5end |
EntrezGene: | SLC22A7 |
HGNC: | 10971 |
UniProt: | Q9Y694Q5T051Q8WWC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.86e-24 | 19 |
digestive gland | 4.86e-24 | 19 |
liver bud | 4.86e-24 | 19 |
hepatic diverticulum | 8.62e-21 | 22 |
liver primordium | 8.62e-21 | 22 |
digestive tract diverticulum | 6.78e-20 | 23 |
epithelial sac | 2.56e-18 | 25 |
epithelium of foregut-midgut junction | 2.56e-18 | 25 |
anatomical boundary | 2.56e-18 | 25 |
hepatobiliary system | 2.56e-18 | 25 |
foregut-midgut junction | 2.56e-18 | 25 |
septum transversum | 2.56e-18 | 25 |
sac | 1.28e-17 | 26 |
abdomen element | 4.21e-16 | 54 |
abdominal segment element | 4.21e-16 | 54 |
exocrine gland | 8.40e-15 | 31 |
exocrine system | 8.40e-15 | 31 |
abdominal segment of trunk | 1.83e-14 | 60 |
abdomen | 1.83e-14 | 60 |
endocrine gland | 4.01e-13 | 35 |
endocrine system | 3.18e-10 | 45 |
gut epithelium | 1.58e-08 | 54 |
trunk region element | 1.88e-08 | 101 |
gland | 8.35e-08 | 59 |
subdivision of trunk | 1.39e-07 | 112 |