FFCP PHASE1:Hg19::chr14:106539557..106539581,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5559 | |HGNC=5559 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390599_5end | |association_with_transcript=0bp_to_ENST00000390599_5end | ||
|cluster_id=chr14:106539557..106539581,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_1_at_IGHV1-8_5end | |description=CAGE_peak_1_at_IGHV1-8_5end | ||
|id=chr14:106539557..106539581,- | |id=chr14:106539557..106539581,- | ||
|ontology_enrichment_celltype=CL:0000236!1.04e-17!14;CL:0000945!1.86e-13!24;CL:0000826!1.86e-13!24;CL:0002087!8.12e-07!119 | |ontology_enrichment_celltype=CL:0000236!1.04e-17!14;CL:0000945!1.86e-13!24;CL:0000826!1.86e-13!24;CL:0002087!8.12e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.86e-23;13!CL:0000945;2.16e-11;24!CL:0000226;1.25e-07;3!CL:0000842;1.25e-07;3!CL:0002619;2.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.42e-21,14;CL:0000945,2.15e-11,24;CL:0000826,2.15e-11,24;CL:0000226,1.28e-07,3;CL:0000842,1.28e-07,3;CL:0002619,2.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-44!115;UBERON:0000178!1.01e-14!15;UBERON:0000179!1.01e-14!15;UBERON:0000463!1.01e-14!15;UBERON:0002193!3.46e-07!112;UBERON:0002390!4.28e-07!102;UBERON:0003061!4.28e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-20;15!UBERON:0000179;1.12e-20;15!UBERON:0000463;1.12e-20;15!UBERON:0002390;4.61e-14;32!UBERON:0002193;4.47e-10;42!UBERON:0007023;3.91e-09;114!UBERON:0004177;4.89e-08;5!UBERON:0005057;4.89e-08;5!UBERON:0000160;3.54e-07;17!UBERON:0004921;6.03e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.86e-38,114;UBERON:0000178,1.17e-20,15;UBERON:0000179,1.17e-20,15;UBERON:0000463,1.17e-20,15;UBERON:0004921,3.28e-08,118;UBERON:0005409,2.61e-07,25;UBERON:0000160,3.52e-07,17;UBERON:0001007,9.56e-07,145;UBERON:0001555,9.56e-07,145;UBERON:0007026,9.56e-07,145 | |||
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| ||
|short_description=p1@IGHV1-8 | |short_description=p1@IGHV1-8 | ||
}} | }} |
Latest revision as of 22:03, 18 September 2015
Short description: | p1@IGHV1-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV1-8_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | 0bp_to_ENST00000390599_5end |
EntrezGene: | NA |
HGNC: | 5559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.42e-21 | 14 |
lymphocyte of B lineage | 2.15e-11 | 24 |
pro-B cell | 2.15e-11 | 24 |
single nucleate cell | 1.28e-07 | 3 |
mononuclear cell | 1.28e-07 | 3 |
adult endothelial progenitor cell | 2.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.86e-38 | 114 |
blood | 1.17e-20 | 15 |
haemolymphatic fluid | 1.17e-20 | 15 |
organism substance | 1.17e-20 | 15 |
subdivision of digestive tract | 3.28e-08 | 118 |
gastrointestinal system | 2.61e-07 | 25 |
intestine | 3.52e-07 | 17 |
digestive system | 9.56e-07 | 145 |
digestive tract | 9.56e-07 | 145 |
primitive gut | 9.56e-07 | 145 |