FFCP PHASE1:Hg19::chr11:62649322..62649383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000457660_5end | |association_with_transcript=45bp_to_ENST00000457660_5end | ||
|cluster_id=chr11:62649322..62649383,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_7_at_SLC3A2_5end | |description=CAGE_peak_7_at_SLC3A2_5end | ||
|id=chr11:62649322..62649383,+ | |id=chr11:62649322..62649383,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.64e-15!679;CL:0000004!1.64e-15!679;CL:0000255!1.64e-15!679;CL:0000012!1.78e-15!682;CL:0002057!3.80e-14!42;CL:0000860!3.98e-14!45;CL:0000063!3.82e-11!578;CL:0000003!1.92e-10!722;CL:0002009!1.55e-09!65;CL:0002194!2.40e-09!63;CL:0000576!2.40e-09!63;CL:0000040!2.40e-09!63;CL:0000559!2.40e-09!63;CL:0000066!2.44e-09!254;CL:0000839!3.70e-09!70;CL:0000557!2.24e-08!71;CL:0000144!5.86e-08!625;CL:0000766!3.40e-07!76;CL:0002076!5.03e-07!43 | |ontology_enrichment_celltype=CL:0000548!1.64e-15!679;CL:0000004!1.64e-15!679;CL:0000255!1.64e-15!679;CL:0000012!1.78e-15!682;CL:0002057!3.80e-14!42;CL:0000860!3.98e-14!45;CL:0000063!3.82e-11!578;CL:0000003!1.92e-10!722;CL:0002009!1.55e-09!65;CL:0002194!2.40e-09!63;CL:0000576!2.40e-09!63;CL:0000040!2.40e-09!63;CL:0000559!2.40e-09!63;CL:0000066!2.44e-09!254;CL:0000839!3.70e-09!70;CL:0000557!2.24e-08!71;CL:0000144!5.86e-08!625;CL:0000766!3.40e-07!76;CL:0002076!5.03e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.20e-25;33!CL:0002057;7.20e-25;33!CL:0000473;9.02e-18;39!CL:0000234;9.02e-18;39!CL:0000576;1.03e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-18,42;CL:0002057,2.11e-18,42;CL:0000473,1.29e-16,48;CL:0000234,1.29e-16,48;CL:0000839,1.47e-11,66;CL:0002194,1.77e-11,59;CL:0000576,1.77e-11,59;CL:0000040,1.77e-11,59;CL:0000559,1.77e-11,59;CL:0002009,1.01e-10,61;CL:0000557,8.03e-10,67;CL:0000766,1.57e-09,72;CL:0002076,1.20e-07,42;CL:0000066,6.72e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-14;42 | |||
|ontology_enrichment_disease=DOID:0050687!1.94e-08!143;DOID:305!5.73e-08!106;DOID:14566!7.84e-08!239;DOID:162!4.46e-07!235 | |ontology_enrichment_disease=DOID:0050687!1.94e-08!143;DOID:305!5.73e-08!106;DOID:14566!7.84e-08!239;DOID:162!4.46e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.16e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-08,76;UBERON:0001474,1.39e-07,82 | |||
|phase1_expression=0.908391896352783,0.856402095563933,1.9733616573436,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.737201809504527,1.39560233594486,0.873765488520689,0.527533956456907,0.37129905888014,0,0.672325146451775,0,0,0,0.246242116153576,0.612002073732759,0.626909442956176,0.286235987131057,0.547497700291537,0,0.305653622991805,0.164201178899891,0.314843125254717,1.18009283054671,0.383829398097213,1.54816123316076,0.919421224478927,1.8072355126695,9.61360426433648,0.232401601740905,0.426507697462265,0.587200878669695,0.553995408531877,0.401088894940283,0.651032612147555,0.447830948479849,0.32389366601898,0.257575567634187,1.59938062657521,3.02300754951048,2.18325655069035,6.50801303335917,9.04569353648017,12.078548464909,13.8092348314632,9.22178543504762,13.9524515634265,10.6871161028352,10.973239620925,20.3139729891513,6.02375486536335,7.09555990150399,8.7642158933583,15.610278510916,10.5906578935111,10.8687311385837,2.63881040149373,3.78980949481101,5.54092175692502,17.1223450790865,14.1846306172785,12.4564449799115,7.03496262718881,6.25779502104242,9.33912032232002,9.08099253950053,16.2042159834528,13.607882659958,0.845021145247767,0.850417199860174,0.209658645508376,0.786300418025466,1.05123824989054,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,1.70763890732835,1.17447437874188,0,0,1.68152568894461,0.263384084775077,0.983548850569165,0.393010762749165,0.822405995998037,0.334372990781356,0,0.473447805734733,0,0,1.17842362989935,0.886135578334485,0,0.768547918354051,0.260118695119756,0.164437904603676,0.552700035571697,0.289803085735052,0.444859689486181,0.267540828089713,0,0.453237370790265,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0.670700859703636,0.511450247374121,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.614843499851882,0.327447688744282,2.5500670180478,3.33705998505986,0.649094787309367,0,0.664789802594326,0.238490624305342,0.571994910780128,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0.872188104285069,0.993943903390637,1.39293562831038,1.58891016975863,4.01571269048339,0.709336764396714,0.560677600142307,0,1.72667283892012,0,2.2900814251847,0.326923806226917,0.454072282934794,0,27.1812860927204,0,0.570471821544449,0.298897361103602,3.52303495931295,2.26622122115384,0.421352420106746,0.204154171254893,0.737005903870608,2.58314452939414,0,1.97813543422845,0,6.46756327634615,0.841680569770331,0.500474079487857,0,0,0.30648779579902,0.45071417671979,0.340296549480063,1.07633781413317,1.49490172172997,0,2.40072876867522,0.824420233907511,1.54584324027377,0.37223371266318,0.843881661206331,0.876933046450788,0.757301322732344,0.644349290496095,0.646584227275248,0.710019185033229,0.705264687593482,0,0.193260853163297,0.272746120590835,0.573609190778008,0.853815942907168,0.397589304964456,1.16193942869518,1.14027160516907,0.756962552626885,0.72995471815166,0,0,0,0,0.721879481669586,0.591534000199219,2.02301628093722,0,0.772057809126758,1.08939722046203,0.474541238222193,0.808987848960987,0.588664395376038,0,0.738155454624648,0,0.8231480226628,0,0,0,0,2.20731549707325,1.72183813960359,0.514703430895577,0.658501712451753,3.37205259772859,1.20634766893957,0.740707561268237,24.4356228982744,1.03993478527958,0,0.34779121492523,0.234817388471643,0.288732895522148,0.462985512576611,0.761016608938393,0,0.858486162094873,0.738651018262192,0.234004265139238,0.743155811443641,0,0.335964256397719,1.13420077793909,5.91086249838799,4.06887513919547,1.15014803749563,0,0.176096868026452,1.03664057770386,0.432359860250884,1.00993946741104,0.825472625798197,1.52795370223311,3.51652341630141,0,0.822619941626588,0.600686115687835,0.571652865261156,0.672786506072164,1.30788020649984,0.2933531432838,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0,0,0,1.14382394926518,1.08524321078289,0,0,0.355391948742546,0,0,0,0.399891964728228,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,1.90544744788996,0,0.431255149719035,0.641715181398742,0.76228387266739,0,0.773288812777695,0.837581326671744,1.27587750330633,0.749007023947182,0,0,0.613457458595699,0,0.542530047399471,1.87173775377726,1.60586089917446,0.315404830067869,0.117141414992713,1.20378439891088,2.27407504055985,4.1389228517002,0.664225598535437,0,1.04260337361699,2.15381273209015,1.71571711905428,0,0.215714200818617,0.213455115606889,5.45629628603267,8.32177197552485,3.62868351995616,1.24053903909388,1.2276957863045,2.24528075546459,1.28139149255701,0.511707249066704,0.965123526861645,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,2.05461064305758,1.40354529212299,2.02578175658972,1.7222167224691,2.3671851840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| ||
|short_description=p7@SLC3A2 | |short_description=p7@SLC3A2 | ||
}} | }} |
Latest revision as of 22:08, 18 September 2015
Short description: | p7@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC3A2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 45bp_to_ENST00000457660_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.11e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.11e-18 | 42 |
defensive cell | 1.29e-16 | 48 |
phagocyte | 1.29e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.47e-11 | 66 |
monopoietic cell | 1.77e-11 | 59 |
monocyte | 1.77e-11 | 59 |
monoblast | 1.77e-11 | 59 |
promonocyte | 1.77e-11 | 59 |
macrophage dendritic cell progenitor | 1.01e-10 | 61 |
granulocyte monocyte progenitor cell | 8.03e-10 | 67 |
myeloid leukocyte | 1.57e-09 | 72 |
endo-epithelial cell | 1.20e-07 | 42 |
epithelial cell | 6.72e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-08 | 76 |
bone element | 1.39e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.16e-07 | 106 |