FFCP PHASE1:Hg19::chr10:69834427..69834437,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26091 | |EntrezGene=26091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24521 | |HGNC=24521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=176bp_to_ENST00000505760_5end | |association_with_transcript=176bp_to_ENST00000505760_5end | ||
|cluster_id=chr10:69834427..69834437,- | |||
|coexpression_cluster_id=C2068 | |||
|description=CAGE_peak_12_at_HERC4_5end | |description=CAGE_peak_12_at_HERC4_5end | ||
|id=chr10:69834427..69834437,- | |id=chr10:69834427..69834437,- | ||
|ontology_enrichment_celltype=CL:0002620!1.70e-08!23 | |ontology_enrichment_celltype=CL:0002620!1.70e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.64e-18;23!CL:0002591;3.82e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.26e-18,23;CL:0002591,4.72e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.66e-10!239;DOID:305!4.40e-09!106;DOID:0050687!6.96e-09!143;DOID:162!9.68e-09!235;DOID:17!3.41e-07!5;DOID:450!3.41e-07!5;DOID:66!3.41e-07!5;DOID:423!3.41e-07!5;DOID:0080000!3.41e-07!5;DOID:11722!3.41e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.09e-10;3!DOID:127;2.09e-10;3!DOID:3112;3.82e-08;1!DOID:4235;3.82e-08;1!DOID:0060072;5.16e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.71e-10,3;DOID:127,2.71e-10,3;DOID:4235,3.10e-08,1;DOID:3112,3.33e-08,1;DOID:0060072,6.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.77e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!1.77e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.82e-08;1!UBERON:0005056;3.82e-08;1!UBERON:0004176;3.82e-08;1!UBERON:0002097;3.34e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.19e-10,41;UBERON:0002199,1.27e-08,46;UBERON:0002416,1.27e-08,46;UBERON:0000997,2.89e-08,1;UBERON:0005056,2.89e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,1.44575660953827,0,0.579386075843295,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0.993943903390637,0.12663051166458,2.51577443545116,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.554128230968366,0.877955241761676,0,0.150238058906597,0,2.33206526395521,0.213557388818567,0.847727604638247,2.40072876867522,0.824420233907511,1.03056216018252,0,2.02531598689519,0.194874010322397,0.757301322732344,0.0920498986422993,0,3.55009592516614,2.11579406278045,1.18692414617341,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.268675568108545,0.581267877027924,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,1.02738161275192,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,1.39453664789186,0.62962469366128,1.3940745403212,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0.272999822815972,0,1.13008116620243,1.10273068709225,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.153900517007594,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.37189356380129,0.0870592065804026,0,0.343972064943233,1.06431964417994,0.730893170861856,0.492692742319255,0,0,0.225980740780532,0.137041924646751,0.397429223405979,0.126621591911757,1.17330829640882,0.0801588202515337,0.213452994739353,0,0,0,0,0.864328787928898,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0.670869375198532,0,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0,1.08599920350743,3.45688596480507,0.326587360109409,0,0,0.681552087141687,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,1.52322084867518,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0.358177682162975,0.308801447160972,0,0.530067437837643,1.73622634443823,0,0,0,2.43087964941906,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,1.31017534008077,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0.62164849248911,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.305966489225945,0.26721740526556,1.28652859348783,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,1.44575660953827,0,0.579386075843295,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0.993943903390637,0.12663051166458,2.51577443545116,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.554128230968366,0.877955241761676,0,0.150238058906597,0,2.33206526395521,0.213557388818567,0.847727604638247,2.40072876867522,0.824420233907511,1.03056216018252,0,2.02531598689519,0.194874010322397,0.757301322732344,0.0920498986422993,0,3.55009592516614,2.11579406278045,1.18692414617341,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.268675568108545,0.581267877027924,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,1.02738161275192,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,1.39453664789186,0.62962469366128,1.3940745403212,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0.272999822815972,0,1.13008116620243,1.10273068709225,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0.153900517007594,0,0,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.37189356380129,0.0870592065804026,0,0.343972064943233,1.06431964417994,0.730893170861856,0.492692742319255,0,0,0.225980740780532,0.137041924646751,0.397429223405979,0.126621591911757,1.17330829640882,0.0801588202515337,0.213452994739353,0,0,0,0,0.864328787928898,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0,0.670869375198532,0,0.0524545881349981,0,0.35857467866569,0.191915197319445,0,0,0,1.08599920350743,3.45688596480507,0.326587360109409,0,0,0.681552087141687,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,1.52322084867518,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0.358177682162975,0.308801447160972,0,0.530067437837643,1.73622634443823,0,0,0,2.43087964941906,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,1.31017534008077,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0.62164849248911,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0,0.305966489225945,0.26721740526556,1.28652859348783,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p12@HERC4 | |short_description=p12@HERC4 | ||
}} | }} |
Latest revision as of 22:25, 18 September 2015
Short description: | p12@HERC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HERC4_5end |
Coexpression cluster: | C2068_Fibroblast_Chondrocyte_leiomyoma_spindle_mesenchymal_basal_mesothelioma |
Association with transcript: | 176bp_to_ENST00000505760_5end |
EntrezGene: | HERC4 |
HGNC: | 24521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.26e-18 | 23 |
smooth muscle cell of the pulmonary artery | 4.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.19e-10 | 41 |
integument | 1.27e-08 | 46 |
integumental system | 1.27e-08 | 46 |
mammalian vulva | 2.89e-08 | 1 |
external female genitalia | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.71e-10 | 3 |
leiomyoma | 2.71e-10 | 3 |
spindle cell sarcoma | 3.10e-08 | 1 |
papillary adenocarcinoma | 3.33e-08 | 1 |
benign neoplasm | 6.26e-08 | 4 |