FFCP PHASE1:Hg19::chr17:18088141..18088193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54890 | |EntrezGene=54890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25996 | |HGNC=25996 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_uc010cpx.2_5end | |association_with_transcript=71bp_to_uc010cpx.2_5end | ||
|cluster_id=chr17:18088141..18088193,+ | |||
|description=CAGE_peak_8_at_ALKBH5_5end | |description=CAGE_peak_8_at_ALKBH5_5end | ||
|id=chr17:18088141..18088193,+ | |id=chr17:18088141..18088193,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.20e-09;6!CL:0002595;1.15e-07;5 | |ontology_enrichment_celltype_v019=CL:0000624;1.20e-09;6!CL:0002595;1.15e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.78e-10,6;CL:0002595,1.05e-07,5;CL:0000359,9.37e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!2.40e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.58e-08;22!UBERON:0001950;1.08e-07;20!UBERON:0003834;1.15e-07;5!UBERON:0001533;1.15e-07;5!UBERON:0003513;1.35e-07;7!UBERON:0000956;7.52e-07;25!UBERON:0000203;7.52e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.58e-08;22!UBERON:0001950;1.08e-07;20!UBERON:0003834;1.15e-07;5!UBERON:0001533;1.15e-07;5!UBERON:0003513;1.35e-07;7!UBERON:0000956;7.52e-07;25!UBERON:0000203;7.52e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.59e-08,22;UBERON:0001950,7.73e-08,20;UBERON:0002780,7.81e-08,41;UBERON:0001890,7.81e-08,41;UBERON:0003080,7.81e-08,41;UBERON:0006240,7.81e-08,41;UBERON:0003834,1.05e-07,5;UBERON:0001533,1.05e-07,5;UBERON:0003513,1.36e-07,7;UBERON:0000956,5.70e-07,25;UBERON:0000203,5.70e-07,25 | |||
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| ||
|short_description=p8@ALKBH5 | |short_description=p8@ALKBH5 | ||
}} | }} |
Latest revision as of 22:44, 18 September 2015
Short description: | p8@ALKBH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALKBH5_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_uc010cpx.2_5end |
EntrezGene: | ALKBH5 |
HGNC: | 25996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.78e-10 | 6 |
smooth muscle cell of the subclavian artery | 1.05e-07 | 5 |
vascular associated smooth muscle cell | 9.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.59e-08 | 22 |
neocortex | 7.73e-08 | 20 |
regional part of forebrain | 7.81e-08 | 41 |
forebrain | 7.81e-08 | 41 |
anterior neural tube | 7.81e-08 | 41 |
future forebrain | 7.81e-08 | 41 |
thoracic segment blood vessel | 1.05e-07 | 5 |
subclavian artery | 1.05e-07 | 5 |
trunk blood vessel | 1.36e-07 | 7 |
cerebral cortex | 5.70e-07 | 25 |
pallium | 5.70e-07 | 25 |