FFCP PHASE2:Hg19::chr18:19750951..19750980,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2627 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4174 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4174 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 22:47, 18 September 2015
Short description: | p10@GATA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GATA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_uc002ktu.1_5end |
EntrezGene: | GATA6 |
HGNC: | 4174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@GATA6 |
---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.52e-12 | 3 |
germ line cell | 3.72e-12 | 7 |
germ cell | 3.72e-12 | 7 |
mesenchymal stem cell of Wharton's jelly | 3.71e-10 | 1 |
androgen binding protein secreting cell | 4.06e-10 | 1 |
seminiferous tubule epithelial cell | 4.06e-10 | 1 |
Sertoli cell | 4.06e-10 | 1 |
fibroblast of tunica adventitia of artery | 9.85e-10 | 4 |
fibroblast of the aortic adventitia | 9.85e-10 | 4 |
smooth muscle cell of the umbilical artery | 1.52e-09 | 4 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
coronary artery | 2.52e-12 | 3 |
artery | 4.54e-12 | 42 |
arterial blood vessel | 4.54e-12 | 42 |
arterial system | 4.54e-12 | 42 |
mesothelium | 4.06e-10 | 1 |
seminiferous tubule of testis | 4.06e-10 | 1 |
epithelium of male gonad | 4.06e-10 | 1 |
epithelial cord | 4.06e-10 | 1 |
sex cord | 4.06e-10 | 1 |
seminiferous tubule epithelium | 4.06e-10 | 1 |
Showing 1 to 10 of 31 entries