FFCP PHASE1:Hg19::chr14:107183929..107183940,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:107183929..107183940,-
|short_description=p1@IGHV3-71
|description=CAGE_peak_1_at_IGHV3-71_5end
|association_with_transcript=-72bp_to_ENST00000523324_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5621 | |HGNC=5621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000523324_5end | |||
|cluster_id=chr14:107183929..107183940,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_1_at_IGHV3-71_5end | |||
|id=chr14:107183929..107183940,- | |||
|ontology_enrichment_celltype=CL:0000945!1.16e-25!24;CL:0000826!1.16e-25!24;CL:0000236!2.62e-17!14;CL:0000838!2.81e-10!52;CL:0000542!4.95e-10!53;CL:0000051!4.95e-10!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.72e-17;1!UBERON:0006298;7.57e-17;1!UBERON:0006242;1.65e-16;1!UBERON:0006595;1.08e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.39e-30!115;UBERON:0001829!1.82e-09!2;UBERON:0001044!6.58e-07!6;UBERON:0003293!6.58e-07!6;UBERON:0003294!6.58e-07!6;UBERON:0010047!6.58e-07!6;UBERON:0000167!6.58e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.72e-17;1!UBERON:0001153;4.72e-17;1!UBERON:0009854;4.72e-17;1!UBERON:0002372;5.98e-17;1!UBERON:0000029;5.98e-17;1!UBERON:0001961;5.98e-17;1!UBERON:0001744;5.98e-17;1!UBERON:0001042;5.98e-17;1!UBERON:0001735;5.98e-17;1!UBERON:0001736;7.57e-17;1!UBERON:0004921;5.08e-14;33!UBERON:0001044;3.39e-11;6!UBERON:0003293;3.39e-11;6!UBERON:0003294;3.39e-11;6!UBERON:0010047;3.39e-11;6!UBERON:0003408;3.39e-11;6!UBERON:0000167;3.39e-11;6!UBERON:0006562;3.86e-09;2!UBERON:0001829;4.34e-09;2!UBERON:0003127;6.42e-09;2!UBERON:0000341;6.42e-09;2!UBERON:0000160;2.78e-08;17!UBERON:0000161;6.54e-08;19!UBERON:0000166;6.54e-08;19!UBERON:0001007;7.15e-08;81!UBERON:0001155;8.31e-08;9!UBERON:0002465;3.54e-07;10!UBERON:0001555;8.47e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.72e-17,1;UBERON:0001153,4.72e-17,1;UBERON:0001045,4.72e-17,1;UBERON:0002372,5.53e-17,1;UBERON:0001961,5.53e-17,1;UBERON:0001744,5.53e-17,1;UBERON:0001735,5.53e-17,1;UBERON:0000029,6.47e-17,1;UBERON:0001736,7.57e-17,1;UBERON:0006298,7.57e-17,1;UBERON:0007023,2.85e-15,114;UBERON:0001044,3.39e-11,6;UBERON:0003293,3.39e-11,6;UBERON:0003294,3.39e-11,6;UBERON:0010047,3.39e-11,6;UBERON:0000167,3.39e-11,6;UBERON:0005409,1.01e-09,25;UBERON:0001829,4.34e-09,2;UBERON:0000341,4.70e-09,2;UBERON:0003127,5.49e-09,2;UBERON:0000160,2.85e-08,17;UBERON:0001155,7.51e-08,9;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0004921,1.35e-07,118;UBERON:0002465,3.54e-07,10;UBERON:0003408,4.52e-07,10;UBERON:0000166,6.62e-07,22;UBERON:0004119,7.08e-07,160;UBERON:0000925,7.08e-07,160;UBERON:0006595,7.08e-07,160 | |||
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| ||
|short_description=p1@IGHV3-71 | |||
}} | }} |
Latest revision as of 22:56, 18 September 2015
Short description: | p1@IGHV3-71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV3-71_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | -72bp_to_ENST00000523324_5end |
EntrezGene: | NA |
HGNC: | 5621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.72e-17 | 1 |
caecum | 4.72e-17 | 1 |
midgut | 4.72e-17 | 1 |
tonsil | 5.53e-17 | 1 |
mucosa-associated lymphoid tissue | 5.53e-17 | 1 |
lymphoid tissue | 5.53e-17 | 1 |
tonsillar ring | 5.53e-17 | 1 |
lymph node | 6.47e-17 | 1 |
submandibular gland | 7.57e-17 | 1 |
submandibular gland primordium | 7.57e-17 | 1 |
adult organism | 2.85e-15 | 114 |
saliva-secreting gland | 3.39e-11 | 6 |
gland of oral region | 3.39e-11 | 6 |
gland of foregut | 3.39e-11 | 6 |
oral gland | 3.39e-11 | 6 |
oral cavity | 3.39e-11 | 6 |
gastrointestinal system | 1.01e-09 | 25 |
major salivary gland | 4.34e-09 | 2 |
throat | 4.70e-09 | 2 |
open tracheal system trachea | 5.49e-09 | 2 |
intestine | 2.85e-08 | 17 |
colon | 7.51e-08 | 9 |
digestive system | 1.12e-07 | 145 |
digestive tract | 1.12e-07 | 145 |
primitive gut | 1.12e-07 | 145 |
subdivision of digestive tract | 1.35e-07 | 118 |
lymphoid system | 3.54e-07 | 10 |
gland of gut | 4.52e-07 | 10 |
oral opening | 6.62e-07 | 22 |
endoderm-derived structure | 7.08e-07 | 160 |
endoderm | 7.08e-07 | 160 |
presumptive endoderm | 7.08e-07 | 160 |