FFCP PHASE1:Hg19::chr6:44187309..44187329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2030 | |EntrezGene=2030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11003 | |HGNC=11003 | ||
|TSSclassifier=strong | |||
|UniProt=Q99808 | |UniProt=Q99808 | ||
|association_with_transcript=-43bp_to_ENST00000313248_5end | |association_with_transcript=-43bp_to_ENST00000313248_5end | ||
|cluster_id=chr6:44187309..44187329,+ | |||
|coexpression_cluster_id=C4606 | |coexpression_cluster_id=C4606 | ||
|description=CAGE_peak_4_at_SLC29A1_5end | |description=CAGE_peak_4_at_SLC29A1_5end | ||
|id=chr6:44187309..44187329,+ | |id=chr6:44187309..44187329,+ | ||
|ontology_enrichment_celltype=CL:0002139;3.32e-12;24!CL:0000115;3.90e-12;36!CL:0000071;9.57e-11;18!CL:0002078;2.57e-09;45!CL:1000497;7.25e-08;17!CL:0002518;7.25e-08;17!CL:1000413;4.30e-07;9!CL:1000449;9.09e-07;15 | |ontology_enrichment_celltype=CL:0000115!2.58e-12!35;CL:0002078!7.38e-12!44;CL:0002139!8.59e-11!24;CL:0000071!1.39e-09!18;CL:0002546!1.39e-09!18;CL:1000497!7.52e-07!18;CL:0002518!7.52e-07!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;3.32e-12;24!CL:0000115;3.90e-12;36!CL:0000071;9.57e-11;18!CL:0002078;2.57e-09;45!CL:1000497;7.25e-08;17!CL:0002518;7.25e-08;17!CL:1000413;4.30e-07;9!CL:1000449;9.09e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.38e-14,36;CL:0002078,1.83e-13,45;CL:0002139,2.82e-12,24;CL:0000071,7.10e-11,18;CL:0002546,7.10e-11,18;CL:1000497,7.97e-08,17;CL:0002518,7.97e-08,17;CL:1000413,4.68e-07,9;CL:1000449,9.29e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;9.57e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;9.57e-11;18!UBERON:0001986;9.57e-11;18!UBERON:0004852;9.57e-11;18!UBERON:0000487;6.29e-09;22!UBERON:0006914;1.11e-07;25!UBERON:0003915;4.30e-07;9!UBERON:0004700;4.30e-07;9!UBERON:0001917;4.30e-07;9!UBERON:0000490;6.54e-07;33!UBERON:0006555;9.09e-07;15!UBERON:0004819;9.09e-07;15!UBERON:0001285;9.09e-07;15!UBERON:0007684;9.09e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.99e-10!118;UBERON:0001986!1.39e-09!18;UBERON:0004638!1.39e-09!18;UBERON:0004852!1.39e-09!18;UBERON:0002417!5.08e-09!61;UBERON:0000916!5.08e-09!61;UBERON:0005172!9.89e-09!55;UBERON:0005173!9.89e-09!55;UBERON:0000926!1.41e-08!448;UBERON:0004120!1.41e-08!448;UBERON:0006603!1.41e-08!448;UBERON:0000025!1.71e-08!194;UBERON:0000487!2.92e-08!22;UBERON:0000922!6.99e-08!612;UBERON:0000468!7.26e-08!659;UBERON:0004111!9.41e-08!241;UBERON:0009569!1.90e-07!113;UBERON:0005177!2.72e-07!107;UBERON:0000466!2.75e-07!126;UBERON:0000923!3.53e-07!604;UBERON:0005291!3.53e-07!604;UBERON:0006598!3.53e-07!604;UBERON:0002532!3.53e-07!604;UBERON:0002050!4.13e-07!605;UBERON:0005423!4.13e-07!605;UBERON:0000480!4.40e-07!626;UBERON:0000467!6.78e-07!625;UBERON:0006914!7.14e-07!25;UBERON:0007023!7.40e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.57e-11;18!UBERON:0001986;9.57e-11;18!UBERON:0004852;9.57e-11;18!UBERON:0000487;6.29e-09;22!UBERON:0006914;1.11e-07;25!UBERON:0003915;4.30e-07;9!UBERON:0004700;4.30e-07;9!UBERON:0001917;4.30e-07;9!UBERON:0000490;6.54e-07;33!UBERON:0006555;9.09e-07;15!UBERON:0004819;9.09e-07;15!UBERON:0001285;9.09e-07;15!UBERON:0007684;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.10e-11,18;UBERON:0001986,7.10e-11,18;UBERON:0004852,7.10e-11,18;UBERON:0002417,5.30e-10,60;UBERON:0000916,5.30e-10,60;UBERON:0005172,1.82e-09,54;UBERON:0005173,1.82e-09,54;UBERON:0000487,4.39e-09,22;UBERON:0003914,4.47e-09,117;UBERON:0005177,8.21e-09,101;UBERON:0009569,9.27e-09,112;UBERON:0006914,9.36e-08,25;UBERON:0003915,4.68e-07,9;UBERON:0004700,4.68e-07,9;UBERON:0001917,4.68e-07,9;UBERON:0006555,7.28e-07,16;UBERON:0004819,7.28e-07,16;UBERON:0004211,9.29e-07,15;UBERON:0009773,9.29e-07,15;UBERON:0001231,9.29e-07,15;UBERON:0001285,9.29e-07,15;UBERON:0007684,9.29e-07,15;UBERON:0004208,9.29e-07,15 | |||
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| ||
|short_description=p4@SLC29A1 | |short_description=p4@SLC29A1 | ||
}} | }} |
Latest revision as of 23:43, 18 September 2015
Short description: | p4@SLC29A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC29A1_5end |
Coexpression cluster: | C4606_mature_choriocarcinoma_Endothelial_pancreatic_CD14_aorta_endometrial |
Association with transcript: | -43bp_to_ENST00000313248_5end |
EntrezGene: | SLC29A1 |
HGNC: | 11003 |
UniProt: | Q99808 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.38e-14 | 36 |
meso-epithelial cell | 1.83e-13 | 45 |
endothelial cell of vascular tree | 2.82e-12 | 24 |
blood vessel endothelial cell | 7.10e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.10e-11 | 18 |
kidney cell | 7.97e-08 | 17 |
kidney epithelial cell | 7.97e-08 | 17 |
endothelial cell of artery | 4.68e-07 | 9 |
epithelial cell of nephron | 9.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.10e-11 | 18 |
endothelium | 7.10e-11 | 18 |
cardiovascular system endothelium | 7.10e-11 | 18 |
abdominal segment of trunk | 5.30e-10 | 60 |
abdomen | 5.30e-10 | 60 |
abdomen element | 1.82e-09 | 54 |
abdominal segment element | 1.82e-09 | 54 |
simple squamous epithelium | 4.39e-09 | 22 |
epithelial tube | 4.47e-09 | 117 |
trunk region element | 8.21e-09 | 101 |
subdivision of trunk | 9.27e-09 | 112 |
squamous epithelium | 9.36e-08 | 25 |
endothelial tube | 4.68e-07 | 9 |
arterial system endothelium | 4.68e-07 | 9 |
endothelium of artery | 4.68e-07 | 9 |
excretory tube | 7.28e-07 | 16 |
kidney epithelium | 7.28e-07 | 16 |
nephron epithelium | 9.29e-07 | 15 |
renal tubule | 9.29e-07 | 15 |
nephron tubule | 9.29e-07 | 15 |
nephron | 9.29e-07 | 15 |
uriniferous tubule | 9.29e-07 | 15 |
nephrogenic mesenchyme | 9.29e-07 | 15 |