FFCP PHASE1:Hg19::chr19:48000747..48000773,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8775 | |EntrezGene=8775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7641 | |HGNC=7641 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-394bp_to_AK126519_5end | |association_with_transcript=-394bp_to_AK126519_5end | ||
|cluster_id=chr19:48000747..48000773,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_NAPA_5end | |description=CAGE_peak_3_at_NAPA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!1.44e-08!2;CL:0000765!1.44e-08!2;CL:0000050!1.44e-08!2;CL:0000038!1.44e-08!2;CL:0000558!1.44e-08!2;CL:0000547!1.44e-08!2;CL:0000549!1.44e-08!2;CL:0000550!1.44e-08!2;CL:0000552!1.44e-08!2 | |ontology_enrichment_celltype=CL:0000764!1.44e-08!2;CL:0000765!1.44e-08!2;CL:0000050!1.44e-08!2;CL:0000038!1.44e-08!2;CL:0000558!1.44e-08!2;CL:0000547!1.44e-08!2;CL:0000549!1.44e-08!2;CL:0000550!1.44e-08!2;CL:0000552!1.44e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.58e-27;2!CL:0000558;3.58e-27;2 | |ontology_enrichment_celltype_v019=CL:0000764;3.58e-27;2!CL:0000558;3.58e-27;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-27,2;CL:0000765,3.58e-27,2;CL:0000050,3.58e-27,2;CL:0000038,3.58e-27,2;CL:0000558,3.58e-27,2;CL:0000547,3.58e-27,2;CL:0000549,3.58e-27,2;CL:0000550,3.58e-27,2;CL:0000552,3.58e-27,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!2.55e-11!8 | |ontology_enrichment_disease=DOID:1036!2.55e-11!8 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.86e-23!15;UBERON:0000179!1.86e-23!15;UBERON:0000463!1.86e-23!15;UBERON:0007023!3.89e-15!115;UBERON:0002390!4.21e-10!102;UBERON:0003061!4.21e-10!102;UBERON:0002193!9.09e-09!112 | |ontology_enrichment_uberon=UBERON:0000178!1.86e-23!15;UBERON:0000179!1.86e-23!15;UBERON:0000463!1.86e-23!15;UBERON:0007023!3.89e-15!115;UBERON:0002390!4.21e-10!102;UBERON:0003061!4.21e-10!102;UBERON:0002193!9.09e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.89e-71;15!UBERON:0000179;3.89e-71;15!UBERON:0000463;3.89e-71;15!UBERON:0002390;1.17e-37;32!UBERON:0002193;6.85e-19;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.89e-71;15!UBERON:0000179;3.89e-71;15!UBERON:0000463;3.89e-71;15!UBERON:0002390;1.17e-37;32!UBERON:0002193;6.85e-19;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.89e-71,15;UBERON:0000179,3.89e-71,15;UBERON:0000463,3.89e-71,15;UBERON:0007023,6.13e-13,114;UBERON:0002390,2.06e-12,98;UBERON:0003061,2.06e-12,98;UBERON:0002193,3.62e-11,108;UBERON:0004535,5.05e-09,109;UBERON:0001009,9.38e-09,112 | |||
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| ||
|short_description=p3@NAPA | |short_description=p3@NAPA | ||
}} | }} |
Latest revision as of 00:13, 19 September 2015
Short description: | p3@NAPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NAPA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -394bp_to_AK126519_5end |
EntrezGene: | NAPA |
HGNC: | 7641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-27 | 2 |
erythroblast | 3.58e-27 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-27 | 2 |
erythroid progenitor cell | 3.58e-27 | 2 |
reticulocyte | 3.58e-27 | 2 |
proerythroblast | 3.58e-27 | 2 |
basophilic erythroblast | 3.58e-27 | 2 |
polychromatophilic erythroblast | 3.58e-27 | 2 |
orthochromatic erythroblast | 3.58e-27 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.89e-71 | 15 |
haemolymphatic fluid | 3.89e-71 | 15 |
organism substance | 3.89e-71 | 15 |
adult organism | 6.13e-13 | 114 |
hematopoietic system | 2.06e-12 | 98 |
blood island | 2.06e-12 | 98 |
hemolymphoid system | 3.62e-11 | 108 |
cardiovascular system | 5.05e-09 | 109 |
circulatory system | 9.38e-09 | 112 |