FFCP PHASE1:Hg19::chr1:6676813..6676821,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6676813..6676821,+
|short_description=p5@PHF13
|description=CAGE_peak_5_at_PHF13_5end
|association_with_transcript=-60bp_to_AK027492_5end
|EntrezGene=1484...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148479 | |EntrezGene=148479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22983 | |HGNC=22983 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_AK027492_5end | |||
|cluster_id=chr1:6676813..6676821,+ | |||
|description=CAGE_peak_5_at_PHF13_5end | |||
|id=chr1:6676813..6676821,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.83e-14;3!CL:0000775;1.83e-14;3!CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.60e-14,3;CL:0000775,2.09e-14,3;CL:0002188,3.22e-09,5;CL:1000746,6.04e-07,7;CL:1000612,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,6.04e-07,7;UBERON:0000074,6.04e-07,7;UBERON:0001229,6.04e-07,7;UBERON:0001230,6.04e-07,7;UBERON:0003220,6.04e-07,7;UBERON:0005749,6.04e-07,7;UBERON:0004199,6.04e-07,7;UBERON:0004209,6.04e-07,7;UBERON:0004198,6.04e-07,7 | |||
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| ||
|short_description=p5@PHF13 | |||
}} | }} |
Latest revision as of 00:13, 19 September 2015
Short description: | p5@PHF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_AK027492_5end |
EntrezGene: | PHF13 |
HGNC: | 22983 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.60e-14 | 3 |
neutrophil | 2.09e-14 | 3 |
glomerular endothelial cell | 3.22e-09 | 5 |
glomerular cell | 6.04e-07 | 7 |
kidney corpuscule cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 6.04e-07 | 7 |
renal glomerulus | 6.04e-07 | 7 |
renal corpuscle | 6.04e-07 | 7 |
glomerular capsule | 6.04e-07 | 7 |
metanephric mesenchyme | 6.04e-07 | 7 |
glomerular tuft | 6.04e-07 | 7 |
S-shaped body | 6.04e-07 | 7 |
renal vesicle | 6.04e-07 | 7 |
comma-shaped body | 6.04e-07 | 7 |