FFCP PHASE1:Hg19::chr7:5463318..5463335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84629 | |EntrezGene=84629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11962 | |HGNC=11962 | ||
|TSSclassifier=strong | |||
|UniProt=B5ME58,C9JS29,O15417,A3KMH2 | |UniProt=B5ME58,C9JS29,O15417,A3KMH2 | ||
|association_with_transcript=-141bp_to_ENST00000327499,ENST00000399537,ENST00000399544,ENST00000430969,NM_001080495,uc003soi.3_5end | |association_with_transcript=-141bp_to_ENST00000327499,ENST00000399537,ENST00000399544,ENST00000430969,NM_001080495,uc003soi.3_5end | ||
|cluster_id=chr7:5463318..5463335,- | |||
|description=CAGE_peak_10_at_TNRC18_5end | |description=CAGE_peak_10_at_TNRC18_5end | ||
|id=chr7:5463318..5463335,- | |id=chr7:5463318..5463335,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:5093;4.51e-07;4!DOID:1612;4.51e-07;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.49e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.51e-07;4!DOID:1612;4.51e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.33e-07,4;DOID:1612,2.33e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.34e-12!169;UBERON:0000925!1.34e-12!169;UBERON:0006595!1.34e-12!169;UBERON:0001007!1.17e-09!155;UBERON:0001555!1.17e-09!155;UBERON:0007026!1.17e-09!155;UBERON:0000468!1.16e-08!659;UBERON:0004921!1.82e-07!129;UBERON:0004185!1.82e-07!129;UBERON:0005911!2.06e-07!82;UBERON:0000077!3.87e-07!130 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,2.68176656656373,0.872338524100369,0,0,0,1.22866968250754,3.48900583986214,0.873765488520689,0.791300934685361,0.618831764800233,0.331397375727916,0.672325146451775,0,0.730310090387373,0.975865597581014,0.246242116153576,0.408001382488506,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0.246301768349837,0,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,1.76160263600908,0,0.802177789880567,0.217010870715852,0.447830948479849,0.971680998056939,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,2.0956652079634,0.728590576585084,1.48313777113772,0,0.696518949197069,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.825354125820202,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0.760272105718513,0.976248230192678,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,1.74437620857014,0.496971951695318,0.379891534993739,1.19168262731897,1.72101972449288,0,0,0,0.74000264525148,0,0,0.490385709340376,0.454072282934794,0,1.17160715916898,0.312160076830321,0,0.298897361103602,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0,0.413303124703062,1.18800285728205,0.989067717114227,0,0,0,0.375355559615893,0,0.438977620880838,0.612975591598039,0.751190294532984,0.567160915800105,2.15267562826634,0.640672166455702,0.211931901159562,0.900273288253207,0.412210116953756,0.772921620136887,0.37223371266318,1.35021065793013,1.94874010322397,2.52433774244115,0.276149695926898,0.161646056818812,1.42003837006646,0.806016785821122,0.508681776931463,0.386521706326594,0.818238361772504,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0.738155454624648,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,1.35287282397425,0.171567810298526,0.548751427043128,1.1240175325762,0.502644862058154,1.01847289674383,0,1.03993478527958,0,0.231860809950154,0.352226082707465,0,0,0.761016608938393,1.58040879591855,6.86788929675898,0.984868024349589,0,0.594524649154913,0,0.16798212819886,0.141775097242386,1.16426079513703,0.581267877027924,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0,0.517086863031111,3.57656445851882,0,1.06375246633948,0,0.771622122786426,0,0.266422179016099,0,0.542621605391443,0,0.65147236858747,0.710783897485092,0.791951872933429,0.602878754119172,0.871533458600294,1.3996218765488,0,0,0,0.718874566474748,2.29723871668228,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,1.01637849688985,2.60279707715243,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0.414415513436035,0.36807447515742,0,0.271265023699736,0.623912584592421,1.60586089917446,0.788512075169673,0.234282829985426,1.50473049863859,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,2.15381273209015,0.686286847621712,0,0.215714200818617,0,0.606255142892519,0,2.11673205330776,0,2.14846762603287,0.841980283299221,0.384417447767103,0,0.64341568457443,0,0.462629081407967,0.177561725313127,0.246381468041427,0.519254429183621,0.348631135379878,1.32945394550784,0.601519410909855,0.736647911487171,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.721287081534056,0.183138929636687,0.082509499920588,2.29706215198469,1.95018073810956,0,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0.751941714077915,0.870100163485371,0.0852266274161009,0.267096106940212,1.15699440752685,1.53752053892085,2.16941611240793,1.31505115112215,0,0.94443704049192,0,0,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.762520775695299,0.511795582622668,0.42793898803392,0.95460974377781,0,0.179872457583315,0,0.235624804691373,0.202182481573316,1.58510321173008,0,0.48763373908959,0.487426979262569,0,1.09199929126389,0.848432591722276,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0.211107635297664,0.329294892959902,1.13841952129715,1.74967360122491,0.48111056362756,0.670302275535787,1.08890984861323,1.12972560932135,0.86101074534246,3.36942951335251,0.8868603070733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| ||
|short_description=p10@TNRC18 | |short_description=p10@TNRC18 | ||
}} | }} |
Latest revision as of 00:20, 19 September 2015
Short description: | p10@TNRC18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNRC18_5end |
Coexpression cluster: | NA |
Association with transcript: | -141bp_to_ENST00000327499, ENST00000399537, ENST00000399544, ENST00000430969, NM_001080495, uc003soi.3_5end |
EntrezGene: | TNRC18 |
HGNC: | 11962 |
UniProt: | B5ME58C9JS29O15417A3KMH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.33e-07 | 4 |
breast cancer | 2.33e-07 | 4 |