FFCP PHASE1:Hg19::chr15:74425298..74425308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57611 | |EntrezGene=57611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29286 | |HGNC=29286 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=202bp_to_AB384218,BC169327_5end | |association_with_transcript=202bp_to_AB384218,BC169327_5end | ||
|cluster_id=chr15:74425298..74425308,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_14_at_ISLR2_5end | |description=CAGE_peak_14_at_ISLR2_5end | ||
|id=chr15:74425298..74425308,+ | |id=chr15:74425298..74425308,+ | ||
|ontology_enrichment_celltype=CL:0000047;1.29e-13;2!CL:0000123;1.29e-13;2!CL:0000242;1.29e-13;2!CL:0002319;7.04e-09;25 | |ontology_enrichment_celltype=CL:0000242!3.75e-12!2;CL:0000047!1.51e-11!8;CL:0002319!5.97e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000047;1.29e-13;2!CL:0000123;1.29e-13;2!CL:0000242;1.29e-13;2!CL:0002319;7.04e-09;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.07e-13,2;CL:0000047,2.82e-13,8;CL:0002319,6.76e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000922;8.81e-12;49!UBERON:0001950;2.18e-11;20!UBERON:0002619;1.86e-10;22!UBERON:0002114;1.01e-09;2!UBERON:0000956;2.52e-09;25!UBERON:0000203;2.52e-09;25!UBERON:0002791;3.86e-07;32!UBERON:0001869;5.55e-07;32!UBERON:0003528;9.61e-07;34!UBERON:0002020;9.61e-07;34 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.30e-14!32;UBERON:0002791!3.94e-14!33;UBERON:0002020!1.12e-13!34;UBERON:0003528!1.12e-13!34;UBERON:0001893!1.12e-13!34;UBERON:0002780!1.66e-13!41;UBERON:0001890!1.66e-13!41;UBERON:0006240!1.66e-13!41;UBERON:0003080!3.83e-13!42;UBERON:0000341!5.23e-12!2;UBERON:0001950!5.64e-12!20;UBERON:0001017!1.86e-11!82;UBERON:0000073!5.94e-11!94;UBERON:0001016!5.94e-11!94;UBERON:0002619!7.43e-11!22;UBERON:0005743!8.55e-11!86;UBERON:0003056!3.71e-10!61;UBERON:0000956!1.69e-09!25;UBERON:0000203!1.69e-09!25;UBERON:0004121!2.03e-09!169;UBERON:0001049!3.27e-09!57;UBERON:0005068!3.27e-09!57;UBERON:0006241!3.27e-09!57;UBERON:0007135!3.27e-09!57;UBERON:0000924!4.19e-09!173;UBERON:0006601!4.19e-09!173;UBERON:0002616!7.75e-09!59;UBERON:0009663!2.58e-07!7;UBERON:0000955!3.69e-07!69;UBERON:0006238!3.69e-07!69;UBERON:0002426!4.97e-07!1;UBERON:0003831!4.97e-07!1;UBERON:0003898!4.97e-07!1;UBERON:0004830!4.97e-07!1;UBERON:0001774!4.97e-07!1;UBERON:0003830!4.97e-07!1;UBERON:0005175!4.97e-07!1;UBERON:0003897!4.97e-07!1;UBERON:0001103!4.97e-07!1;UBERON:0010084!4.97e-07!1;UBERON:0007029!5.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.81e-12;49!UBERON:0001950;2.18e-11;20!UBERON:0002619;1.86e-10;22!UBERON:0002114;1.01e-09;2!UBERON:0000956;2.52e-09;25!UBERON:0000203;2.52e-09;25!UBERON:0002791;3.86e-07;32!UBERON:0001869;5.55e-07;32!UBERON:0003528;9.61e-07;34!UBERON:0002020;9.61e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.18e-11,20;UBERON:0002619,1.86e-10,22;UBERON:0002114,1.01e-09,2;UBERON:0000956,2.52e-09,25;UBERON:0000203,2.52e-09,25;UBERON:0001017,1.06e-07,81;UBERON:0002791,1.77e-07,32;UBERON:0001869,1.77e-07,32;UBERON:0003528,4.39e-07,34;UBERON:0002020,4.39e-07,34;UBERON:0001893,4.39e-07,34;UBERON:0001016,5.81e-07,89 | |||
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|short_description=p14@ISLR2 | |short_description=p14@ISLR2 | ||
}} | }} |
Latest revision as of 00:25, 19 September 2015
Short description: | p14@ISLR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ISLR2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 202bp_to_AB384218, BC169327_5end |
EntrezGene: | ISLR2 |
HGNC: | 29286 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.07e-13 | 2 |
neuronal stem cell | 2.82e-13 | 8 |
neural cell | 6.76e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.18e-11 | 20 |
regional part of cerebral cortex | 1.86e-10 | 22 |
duodenum | 1.01e-09 | 2 |
cerebral cortex | 2.52e-09 | 25 |
pallium | 2.52e-09 | 25 |
central nervous system | 1.06e-07 | 81 |
regional part of telencephalon | 1.77e-07 | 32 |
cerebral hemisphere | 1.77e-07 | 32 |
brain grey matter | 4.39e-07 | 34 |
gray matter | 4.39e-07 | 34 |
telencephalon | 4.39e-07 | 34 |
nervous system | 5.81e-07 | 89 |