FFCP PHASE1:Hg19::chr22:17403095..17403096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5812 | |HGNC=5812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000521969_5end | |association_with_transcript=-32bp_to_ENST00000521969_5end | ||
|cluster_id=chr22:17403095..17403096,- | |||
|coexpression_cluster_id=C218 | |||
|description=CAGE_peak_1_at_IGKV2OR22-3_5end | |description=CAGE_peak_1_at_IGKV2OR22-3_5end | ||
|id=chr22:17403095..17403096,- | |id=chr22:17403095..17403096,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.64e-30;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.23e-35!115;UBERON:0001829!3.74e-14!2;UBERON:0003408!1.53e-10!10;UBERON:0001044!1.69e-10!6;UBERON:0003293!1.69e-10!6;UBERON:0003294!1.69e-10!6;UBERON:0010047!1.69e-10!6;UBERON:0000167!1.69e-10!6;UBERON:0001007!3.07e-08!155;UBERON:0001555!3.07e-08!155;UBERON:0007026!3.07e-08!155;UBERON:0001736!4.28e-08!1;UBERON:0006298!4.28e-08!1;UBERON:0000029!4.89e-08!1;UBERON:0002372!5.22e-08!1;UBERON:0001961!5.22e-08!1;UBERON:0001744!5.22e-08!1;UBERON:0001735!5.22e-08!1;UBERON:0004921!5.88e-08!129;UBERON:0004185!5.88e-08!129;UBERON:0001831!9.44e-08!1;UBERON:0001567!9.44e-08!1;UBERON:0008801!9.44e-08!1;UBERON:0002363!1.22e-07!1;UBERON:0007647!1.22e-07!1;UBERON:0010115!1.22e-07!1;UBERON:0004119!2.77e-07!169;UBERON:0000925!2.77e-07!169;UBERON:0006595!2.77e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;8.64e-30;1!UBERON:0002372;2.37e-29;1!UBERON:0000029;2.37e-29;1!UBERON:0001961;2.37e-29;1!UBERON:0001744;2.37e-29;1!UBERON:0001042;2.37e-29;1!UBERON:0001735;2.37e-29;1!UBERON:0001044;4.86e-20;6!UBERON:0003293;4.86e-20;6!UBERON:0003294;4.86e-20;6!UBERON:0010047;4.86e-20;6!UBERON:0003408;4.86e-20;6!UBERON:0000167;4.86e-20;6!UBERON:0004921;2.74e-18;33!UBERON:0001829;1.24e-15;2!UBERON:0006562;2.05e-15;2!UBERON:0000161;3.31e-14;19!UBERON:0000166;3.31e-14;19!UBERON:0002465;2.81e-12;10!UBERON:0000165;7.13e-10;28!UBERON:0001041;3.57e-09;14!UBERON:0001555;4.55e-09;54!UBERON:0001007;4.93e-08;81!UBERON:0000160;3.04e-07;17!UBERON:0002108;6.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,7.48e-30,1;UBERON:0006298,7.48e-30,1;UBERON:0000029,1.33e-29,1;UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0001044,4.86e-20,6;UBERON:0003293,4.86e-20,6;UBERON:0003294,4.86e-20,6;UBERON:0010047,4.86e-20,6;UBERON:0000167,4.86e-20,6;UBERON:0001829,1.15e-15,2;UBERON:0003408,1.89e-12,10;UBERON:0000166,2.17e-12,22;UBERON:0002465,2.37e-12,10;UBERON:0000165,1.44e-09,29;UBERON:0000930,1.44e-09,29;UBERON:0007023,3.49e-09,114;UBERON:0000161,7.77e-08,36;UBERON:0000160,3.24e-07,17;UBERON:0002108,6.04e-07,4 | |||
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|short_description=p1@IGKV2OR22-3 | |short_description=p1@IGKV2OR22-3 | ||
}} | }} |
Latest revision as of 00:38, 19 September 2015
Short description: | p1@IGKV2OR22-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGKV2OR22-3_5end |
Coexpression cluster: | C218_tonsil_lymph_CD19_spleen_colon_appendix_salivary |
Association with transcript: | -32bp_to_ENST00000521969_5end |
EntrezGene: | NA |
HGNC: | 5812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
submandibular gland | 7.48e-30 | 1 |
submandibular gland primordium | 7.48e-30 | 1 |
lymph node | 1.33e-29 | 1 |
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
saliva-secreting gland | 4.86e-20 | 6 |
gland of oral region | 4.86e-20 | 6 |
gland of foregut | 4.86e-20 | 6 |
oral gland | 4.86e-20 | 6 |
oral cavity | 4.86e-20 | 6 |
major salivary gland | 1.15e-15 | 2 |
gland of gut | 1.89e-12 | 10 |
oral opening | 2.17e-12 | 22 |
lymphoid system | 2.37e-12 | 10 |
mouth | 1.44e-09 | 29 |
stomodeum | 1.44e-09 | 29 |
adult organism | 3.49e-09 | 114 |
orifice | 7.77e-08 | 36 |
intestine | 3.24e-07 | 17 |
small intestine | 6.04e-07 | 4 |