FFCP PHASE1:Hg19::chr12:53301119..53301125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F8VQY3 | |UniProt=F8VQY3 | ||
|association_with_transcript=-275bp_to_ENST00000546542_5end | |association_with_transcript=-275bp_to_ENST00000546542_5end | ||
|cluster_id=chr12:53301119..53301125,- | |||
|description=CAGE_peak_14_at_KRT8_5end | |description=CAGE_peak_14_at_KRT8_5end | ||
|id=chr12:53301119..53301125,- | |id=chr12:53301119..53301125,- |
Latest revision as of 01:08, 19 September 2015
Short description: | p14@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KRT8_5end |
Coexpression cluster: | NA |
Association with transcript: | -275bp_to_ENST00000546542_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VQY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p14@KRT8 |
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.61e-23 | 3 |
germ line cell | 5.69e-22 | 7 |
germ cell | 5.69e-22 | 7 |
epithelial cell of large intestine | 7.98e-10 | 2 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.61e-23 | 3 |
rectum | 1.03e-17 | 4 |
lower digestive tract | 2.25e-14 | 5 |
chorion | 1.85e-10 | 7 |
hindgut | 1.84e-08 | 19 |
large intestine | 5.00e-07 | 11 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.23e-18 | 1 |
islet cell tumor | 8.72e-18 | 1 |
endocrine pancreas cancer | 8.72e-18 | 1 |
pancreatic endocrine carcinoma | 8.72e-18 | 1 |
germ cell and embryonal cancer | 2.30e-12 | 22 |
germ cell cancer | 2.30e-12 | 22 |
Showing 1 to 6 of 6 entries