FFCP PHASE1:Hg19::chr10:72645773..72645784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5092 | |EntrezGene=5092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8646 | |HGNC=8646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000493961_5end | |association_with_transcript=-117bp_to_ENST00000493961_5end | ||
|cluster_id=chr10:72645773..72645784,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_PCBD1_5end | |description=CAGE_peak_11_at_PCBD1_5end | ||
|id=chr10:72645773..72645784,- | |id=chr10:72645773..72645784,- | ||
|ontology_enrichment_celltype=CL:0000136!2.99e-15!15;CL:0000325!5.02e-09!39 | |ontology_enrichment_celltype=CL:0000136!2.99e-15!15;CL:0000325!5.02e-09!39 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.14e-10;3!CL:0000182;2.03e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.09e-10,3;CL:0000182,2.03e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.62e-11;11!UBERON:0009497;1.02e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.94e-12!19;UBERON:0006925!1.94e-12!19;UBERON:0008836!1.94e-12!19;UBERON:0008835!8.83e-11!22;UBERON:0003894!8.83e-11!22;UBERON:0009854!2.53e-10!23;UBERON:0007499!1.62e-09!25;UBERON:0009497!1.62e-09!25;UBERON:0000015!1.62e-09!25;UBERON:0002423!1.62e-09!25;UBERON:0006235!1.62e-09!25;UBERON:0004161!1.62e-09!25;UBERON:0005057!3.69e-09!26;UBERON:0009856!3.69e-09!26;UBERON:0002417!3.98e-08!61;UBERON:0000916!3.98e-08!61;UBERON:0002365!1.02e-07!31;UBERON:0002330!1.02e-07!31;UBERON:0002368!7.42e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.03e-24;19!UBERON:0006925;3.03e-24;19!UBERON:0002423;1.40e-18;25!UBERON:0002365;6.01e-15;31!UBERON:0002330;6.01e-15;31!UBERON:0002368;1.44e-12;33!UBERON:0000949;3.94e-09;43!UBERON:0005172;3.91e-07;52!UBERON:0005173;3.91e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.12e-24,19;UBERON:0006925,3.12e-24,19;UBERON:0008836,3.12e-24,19;UBERON:0008835,5.12e-21,22;UBERON:0003894,5.12e-21,22;UBERON:0009854,3.94e-20,23;UBERON:0007499,1.43e-18,25;UBERON:0009497,1.43e-18,25;UBERON:0000015,1.43e-18,25;UBERON:0002423,1.43e-18,25;UBERON:0006235,1.43e-18,25;UBERON:0004161,1.43e-18,25;UBERON:0009856,7.03e-18,26;UBERON:0002365,4.33e-15,31;UBERON:0002330,4.33e-15,31;UBERON:0002368,1.99e-13,35;UBERON:0000949,1.48e-10,45;UBERON:0003929,7.12e-09,54;UBERON:0005172,7.12e-09,54;UBERON:0005173,7.12e-09,54;UBERON:0002530,3.70e-08,59;UBERON:0002417,4.98e-08,60;UBERON:0000916,4.98e-08,60 | |||
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|short_description=p11@PCBD1 | |short_description=p11@PCBD1 | ||
}} | }} |
Latest revision as of 03:03, 19 September 2015
Short description: | p11@PCBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PCBD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -117bp_to_ENST00000493961_5end |
EntrezGene: | PCBD1 |
HGNC: | 8646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.09e-10 | 3 |
hepatocyte | 2.03e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.12e-24 | 19 |
digestive gland | 3.12e-24 | 19 |
liver bud | 3.12e-24 | 19 |
hepatic diverticulum | 5.12e-21 | 22 |
liver primordium | 5.12e-21 | 22 |
digestive tract diverticulum | 3.94e-20 | 23 |
epithelial sac | 1.43e-18 | 25 |
epithelium of foregut-midgut junction | 1.43e-18 | 25 |
anatomical boundary | 1.43e-18 | 25 |
hepatobiliary system | 1.43e-18 | 25 |
foregut-midgut junction | 1.43e-18 | 25 |
septum transversum | 1.43e-18 | 25 |
sac | 7.03e-18 | 26 |
exocrine gland | 4.33e-15 | 31 |
exocrine system | 4.33e-15 | 31 |
endocrine gland | 1.99e-13 | 35 |
endocrine system | 1.48e-10 | 45 |
gut epithelium | 7.12e-09 | 54 |
abdomen element | 7.12e-09 | 54 |
abdominal segment element | 7.12e-09 | 54 |
gland | 3.70e-08 | 59 |
abdominal segment of trunk | 4.98e-08 | 60 |
abdomen | 4.98e-08 | 60 |