FFCP PHASE1:Hg19::chr19:4909505..4909520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29128 | |EntrezGene=29128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12556 | |HGNC=12556 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T88,B5ME40,A0JBR2 | |UniProt=Q96T88,B5ME40,A0JBR2 | ||
|association_with_transcript=0bp_to_ENST00000262952,ENST00000396708,NM_001048201,uc002mbo.2,uc010xik.1_5end | |association_with_transcript=0bp_to_ENST00000262952,ENST00000396708,NM_001048201,uc002mbo.2,uc010xik.1_5end | ||
|cluster_id=chr19:4909505..4909520,+ | |||
|description=CAGE_peak_1_at_UHRF1_5end | |description=CAGE_peak_1_at_UHRF1_5end | ||
|id=chr19:4909505..4909520,+ | |id=chr19:4909505..4909520,+ | ||
|ontology_enrichment_celltype=CL:0000012!4.03e-15!682;CL:0000548!7.39e-15!679;CL:0000004!7.39e-15!679;CL:0000255!7.39e-15!679;CL:0000066!2.17e-13!254;CL:0000055!3.44e-11!180;CL:0002321!1.10e-10!248;CL:0000220!1.23e-10!246;CL:0000003!3.70e-09!722;CL:0000333!1.35e-07!41;CL:0002319!1.40e-07!25;CL:0000133!3.62e-07!59;CL:0000095!6.02e-07!17;CL:0000123!6.02e-07!17;CL:0000144!7.36e-07!625 | |ontology_enrichment_celltype=CL:0000012!4.03e-15!682;CL:0000548!7.39e-15!679;CL:0000004!7.39e-15!679;CL:0000255!7.39e-15!679;CL:0000066!2.17e-13!254;CL:0000055!3.44e-11!180;CL:0002321!1.10e-10!248;CL:0000220!1.23e-10!246;CL:0000003!3.70e-09!722;CL:0000333!1.35e-07!41;CL:0002319!1.40e-07!25;CL:0000133!3.62e-07!59;CL:0000095!6.02e-07!17;CL:0000123!6.02e-07!17;CL:0000144!7.36e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.11e-07;25!CL:0000095;4.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.89e-14,253;CL:0002321,5.62e-11,250;CL:0000333,9.02e-08,41;CL:0002319,1.13e-07,25;CL:0000133,2.71e-07,59;CL:0000095,5.00e-07,17;CL:0000123,5.00e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.60e-29!235;DOID:14566!1.60e-28!239;DOID:2531!3.91e-16!51;DOID:0060083!3.91e-16!51;DOID:0050686!3.51e-14!137;DOID:1240!1.91e-13!39;DOID:0050687!3.15e-12!143;DOID:8692!4.58e-10!31;DOID:305!7.08e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.04e-11;39!DOID:2531;3.72e-10;51!DOID:0060083;3.72e-10;51!DOID:8692;7.73e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.67e-28,235;DOID:14566,4.00e-28,239;DOID:2531,2.36e-16,51;DOID:0060083,2.36e-16,51;DOID:0050686,5.97e-14,137;DOID:1240,1.27e-13,39;DOID:0050687,5.51e-12,143;DOID:8692,3.41e-10,31;DOID:305,1.20e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@UHRF1 | |short_description=p1@UHRF1 | ||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p1@UHRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UHRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262952, ENST00000396708, NM_001048201, uc002mbo.2, uc010xik.1_5end |
EntrezGene: | UHRF1 |
HGNC: | 12556 |
UniProt: | Q96T88B5ME40A0JBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.89e-14 | 253 |
embryonic cell | 5.62e-11 | 250 |
migratory neural crest cell | 9.02e-08 | 41 |
neural cell | 1.13e-07 | 25 |
neurectodermal cell | 2.71e-07 | 59 |
neuron associated cell | 5.00e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.00e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.67e-28 | 235 |
disease of cellular proliferation | 4.00e-28 | 239 |
hematologic cancer | 2.36e-16 | 51 |
immune system cancer | 2.36e-16 | 51 |
organ system cancer | 5.97e-14 | 137 |
leukemia | 1.27e-13 | 39 |
cell type cancer | 5.51e-12 | 143 |
myeloid leukemia | 3.41e-10 | 31 |
carcinoma | 1.20e-08 | 106 |