FFCP PHASE1:Hg19::chr19:4910177..4910205,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=29128 | |EntrezGene=29128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=12556 | |HGNC=12556 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q96T88 | |UniProt=Q96T88 | ||
|association_with_transcript=0bp_to_ENST00000455180,uc010duf.2_5end | |association_with_transcript=0bp_to_ENST00000455180,uc010duf.2_5end | ||
|cluster_id=chr19:4910177..4910205,+ | |||
|coexpression_cluster_id=C3809 | |coexpression_cluster_id=C3809 | ||
|description=CAGE_peak_4_at_UHRF1_5end | |description=CAGE_peak_4_at_UHRF1_5end |
Latest revision as of 03:08, 19 September 2015
Short description: | p4@UHRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UHRF1_5end |
Coexpression cluster: | C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast |
Association with transcript: | 0bp_to_ENST00000455180, uc010duf.2_5end |
EntrezGene: | UHRF1 |
HGNC: | 12556 |
UniProt: | Q96T88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@UHRF1 |
---|
0
2
4
6
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.93e-08 | 23 |
motile cell | 1.56e-07 | 386 |
oligodendrocyte | 2.05e-07 | 7 |
macroglial cell | 2.05e-07 | 7 |
astrocyte | 2.05e-07 | 7 |
oligodendrocyte precursor cell | 2.05e-07 | 7 |
kidney cortical cell | 4.62e-07 | 12 |
renal cortical epithelial cell | 4.62e-07 | 12 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 8.15e-09 | 11 |
vasculature of eye | 3.03e-08 | 6 |
uvea | 3.03e-08 | 6 |
vasculature of head | 3.03e-08 | 6 |
anterior segment of eyeball | 6.01e-08 | 14 |
cortex | 1.28e-07 | 15 |
cortex of kidney | 4.62e-07 | 12 |
renal parenchyma | 4.62e-07 | 12 |
camera-type eye | 7.36e-07 | 20 |
simple eye | 7.36e-07 | 20 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.48e-15 | 51 |
immune system cancer | 5.48e-15 | 51 |
leukemia | 1.36e-14 | 39 |
myeloid leukemia | 6.19e-12 | 31 |
Showing 1 to 4 of 4 entries