FFCP PHASE1:Hg19::chr22:19467408..19467480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8318 | |EntrezGene=8318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1739 | |HGNC=1739 | ||
|TSSclassifier=strong | |||
|UniProt=O75419,B4DDB4,E9PDH7,B4DDU3 | |UniProt=O75419,B4DDB4,E9PDH7,B4DDU3 | ||
|association_with_transcript=0bp_to_ENST00000263201,ENST00000404724,ENST00000437685,ENST00000483431,NM_001178010,NM_001178011,NM_003504,uc002zpr.2,uc002zps.2,uc002zpt.2,uc011agz.1,uc011aha.1_5end | |association_with_transcript=0bp_to_ENST00000263201,ENST00000404724,ENST00000437685,ENST00000483431,NM_001178010,NM_001178011,NM_003504,uc002zpr.2,uc002zps.2,uc002zpt.2,uc011agz.1,uc011aha.1_5end | ||
|cluster_id=chr22:19467408..19467480,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_CDC45_5end | |description=CAGE_peak_1_at_CDC45_5end | ||
|id=chr22:19467408..19467480,+ | |id=chr22:19467408..19467480,+ | ||
|ontology_enrichment_celltype=CL:0000012!5.89e-21!682;CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000066!4.98e-18!254;CL:0000003!2.76e-12!722;CL:0002321!3.36e-11!248;CL:0000220!7.16e-11!246;CL:0000063!5.07e-09!578;CL:0000144!1.15e-08!625;CL:0000333!1.78e-07!41;CL:0000055!9.41e-07!180 | |ontology_enrichment_celltype=CL:0000012!5.89e-21!682;CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000066!4.98e-18!254;CL:0000003!2.76e-12!722;CL:0002321!3.36e-11!248;CL:0000220!7.16e-11!246;CL:0000063!5.07e-09!578;CL:0000144!1.15e-08!625;CL:0000333!1.78e-07!41;CL:0000055!9.41e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.35e-18,253;CL:0002321,8.25e-11,250;CL:0000333,1.94e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.31e-42!235;DOID:14566!4.80e-41!239;DOID:2531!1.44e-23!51;DOID:0060083!1.44e-23!51;DOID:0050686!1.67e-22!137;DOID:1240!3.82e-20!39;DOID:0050687!3.69e-18!143;DOID:8692!8.59e-16!31;DOID:305!1.65e-14!106 | |ontology_enrichment_disease=DOID:162!1.31e-42!235;DOID:14566!4.80e-41!239;DOID:2531!1.44e-23!51;DOID:0060083!1.44e-23!51;DOID:0050686!1.67e-22!137;DOID:1240!3.82e-20!39;DOID:0050687!3.69e-18!143;DOID:8692!8.59e-16!31;DOID:305!1.65e-14!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.11e-16;39!DOID:8692;1.77e-15;31!DOID:2531;7.43e-15;51!DOID:0060083;7.43e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.41e-42,235;DOID:14566,5.27e-41,239;DOID:2531,6.46e-24,51;DOID:0060083,6.46e-24,51;DOID:0050686,1.72e-22,137;DOID:1240,1.95e-20,39;DOID:0050687,5.40e-18,143;DOID:8692,5.12e-16,31;DOID:305,2.25e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CDC45 | |short_description=p1@CDC45 | ||
}} | }} |
Latest revision as of 03:16, 19 September 2015
Short description: | p1@CDC45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC45_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000263201, ENST00000404724, ENST00000437685, ENST00000483431, NM_001178010, NM_001178011, NM_003504, uc002zpr.2, uc002zps.2, uc002zpt.2, uc011agz.1, uc011aha.1_5end |
EntrezGene: | CDC45 |
HGNC: | 1739 |
UniProt: | O75419B4DDB4E9PDH7B4DDU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.35e-18 | 253 |
embryonic cell | 8.25e-11 | 250 |
migratory neural crest cell | 1.94e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.41e-42 | 235 |
disease of cellular proliferation | 5.27e-41 | 239 |
hematologic cancer | 6.46e-24 | 51 |
immune system cancer | 6.46e-24 | 51 |
organ system cancer | 1.72e-22 | 137 |
leukemia | 1.95e-20 | 39 |
cell type cancer | 5.40e-18 | 143 |
myeloid leukemia | 5.12e-16 | 31 |
carcinoma | 2.25e-14 | 106 |