FFCP PHASE1:Hg19::chr11:64404948..64404957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9379 | |EntrezGene=9379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |HGNC=8009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000467055_5end | |association_with_transcript=-31bp_to_ENST00000467055_5end | ||
|cluster_id=chr11:64404948..64404957,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_23_at_NRXN2_5end | |description=CAGE_peak_23_at_NRXN2_5end | ||
|id=chr11:64404948..64404957,- | |id=chr11:64404948..64404957,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease=DOID:154!2.73e-11!2;DOID:4236!2.73e-11!2 | |ontology_enrichment_disease=DOID:154!2.73e-11!2;DOID:4236!2.73e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!4.22e-21!1;UBERON:0007190!6.31e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0003135!4.59e-17!11;UBERON:0000349!7.51e-17!5;UBERON:0001869!4.96e-15!32;UBERON:0001893!3.50e-14!34;UBERON:0002619!4.59e-14!22;UBERON:0000956!1.73e-12!25;UBERON:0000203!1.73e-12!25;UBERON:0002780!7.62e-12!41;UBERON:0001890!7.62e-12!41;UBERON:0006240!7.62e-12!41;UBERON:0003080!1.43e-11!42;UBERON:0001876!2.47e-11!2;UBERON:0001954!3.35e-11!2;UBERON:0003022!3.35e-11!2;UBERON:0002421!3.35e-11!2;UBERON:0002600!3.35e-11!2;UBERON:0001870!4.09e-11!2;UBERON:0000473!4.43e-11!8;UBERON:0007023!1.12e-10!115;UBERON:0002791!1.24e-09!33;UBERON:0002020!2.28e-09!34;UBERON:0003528!2.28e-09!34;UBERON:0001950!4.43e-09!20;UBERON:0003101!7.41e-09!22;UBERON:0000079!7.41e-09!22;UBERON:0001049!1.32e-08!57;UBERON:0005068!1.32e-08!57;UBERON:0006241!1.32e-08!57;UBERON:0007135!1.32e-08!57;UBERON:0002616!2.54e-08!59;UBERON:0003056!4.70e-08!61;UBERON:0006947!6.34e-08!3;UBERON:0004054!6.34e-08!3;UBERON:0000955!4.87e-07!69;UBERON:0006238!4.87e-07!69 | |ontology_enrichment_uberon=UBERON:0001301!4.22e-21!1;UBERON:0007190!6.31e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0003135!4.59e-17!11;UBERON:0000349!7.51e-17!5;UBERON:0001869!4.96e-15!32;UBERON:0001893!3.50e-14!34;UBERON:0002619!4.59e-14!22;UBERON:0000956!1.73e-12!25;UBERON:0000203!1.73e-12!25;UBERON:0002780!7.62e-12!41;UBERON:0001890!7.62e-12!41;UBERON:0006240!7.62e-12!41;UBERON:0003080!1.43e-11!42;UBERON:0001876!2.47e-11!2;UBERON:0001954!3.35e-11!2;UBERON:0003022!3.35e-11!2;UBERON:0002421!3.35e-11!2;UBERON:0002600!3.35e-11!2;UBERON:0001870!4.09e-11!2;UBERON:0000473!4.43e-11!8;UBERON:0007023!1.12e-10!115;UBERON:0002791!1.24e-09!33;UBERON:0002020!2.28e-09!34;UBERON:0003528!2.28e-09!34;UBERON:0001950!4.43e-09!20;UBERON:0003101!7.41e-09!22;UBERON:0000079!7.41e-09!22;UBERON:0001049!1.32e-08!57;UBERON:0005068!1.32e-08!57;UBERON:0006241!1.32e-08!57;UBERON:0007135!1.32e-08!57;UBERON:0002616!2.54e-08!59;UBERON:0003056!4.70e-08!61;UBERON:0006947!6.34e-08!3;UBERON:0004054!6.34e-08!3;UBERON:0000955!4.87e-07!69;UBERON:0006238!4.87e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p23@NRXN2 | |short_description=p23@NRXN2 | ||
}} | }} |
Latest revision as of 03:45, 19 September 2015
Short description: | p23@NRXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NRXN2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -31bp_to_ENST00000467055_5end |
EntrezGene: | NRXN2 |
HGNC: | 8009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |