FFCP PHASE1:Hg19::chr4:86851227..86851248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N264 | |UniProt=Q8N264 | ||
|association_with_transcript=-177bp_to_ENST00000264343,NM_031305,uc003hpm.2_5end | |association_with_transcript=-177bp_to_ENST00000264343,NM_031305,uc003hpm.2_5end | ||
|cluster_id=chr4:86851227..86851248,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_21_at_ARHGAP24_5end | |description=CAGE_peak_21_at_ARHGAP24_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000507!2.84e-09!12;CL:1000494!2.84e-09!12;CL:1000449!8.92e-07!16 | |ontology_enrichment_celltype=CL:1000507!2.84e-09!12;CL:1000494!2.84e-09!12;CL:1000449!8.92e-07!16 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.16e-21;1!UBERON:0007123;9.55e-17;5!UBERON:0007297;3.34e-11;2!UBERON:0003918;4.85e-09;10!UBERON:0007687;4.85e-09;10 | |ontology_enrichment_development_v019=UBERON:0006242;5.16e-21;1!UBERON:0007123;9.55e-17;5!UBERON:0007297;3.34e-11;2!UBERON:0003918;4.85e-09;10!UBERON:0007687;4.85e-09;10 | ||
|ontology_enrichment_disease=DOID:4468!1.28e-07!2 | |ontology_enrichment_disease=DOID:4468!1.28e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.34e-11;2 | |ontology_enrichment_disease_v019=DOID:4468;3.34e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,4.52e-11,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.82e-21,1;UBERON:0002046,9.55e-17,5;UBERON:0004117,9.55e-17,5;UBERON:0007689,9.55e-17,5;UBERON:0007123,9.55e-17,5;UBERON:0003091,9.55e-17,5;UBERON:0002148,4.09e-11,2;UBERON:0006331,4.09e-11,2;UBERON:0009662,4.09e-11,2;UBERON:0009722,3.90e-08,11;UBERON:0007690,3.90e-08,11;UBERON:0002114,5.18e-08,2;UBERON:0006947,5.54e-08,3;UBERON:0004054,5.54e-08,3;UBERON:0002110,6.78e-08,3;UBERON:0006242,6.78e-08,3;UBERON:0000988,7.76e-08,3;UBERON:0002113,1.33e-07,26;UBERON:0003918,1.33e-07,26;UBERON:0011143,1.33e-07,26;UBERON:0005095,1.33e-07,26;UBERON:0007687,1.33e-07,26 | |||
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| ||
|short_description=p21@ARHGAP24 | |short_description=p21@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:49, 19 September 2015
Short description: | p21@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ARHGAP24_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -177bp_to_ENST00000264343, NM_031305, uc003hpm.2_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | Q8N264 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.82e-21 | 1 |
thyroid gland | 9.55e-17 | 5 |
pharyngeal pouch | 9.55e-17 | 5 |
thyroid diverticulum | 9.55e-17 | 5 |
pharyngeal pouch 2 | 9.55e-17 | 5 |
thyroid primordium | 9.55e-17 | 5 |
locus ceruleus | 4.09e-11 | 2 |
brainstem nucleus | 4.09e-11 | 2 |
hindbrain nucleus | 4.09e-11 | 2 |
entire pharyngeal arch endoderm | 3.90e-08 | 11 |
early pharyngeal endoderm | 3.90e-08 | 11 |
duodenum | 5.18e-08 | 2 |
male genital duct | 5.54e-08 | 3 |
internal male genitalia | 5.54e-08 | 3 |
gallbladder | 6.78e-08 | 3 |
gall bladder primordium | 6.78e-08 | 3 |
pons | 7.76e-08 | 3 |
kidney | 1.33e-07 | 26 |
kidney mesenchyme | 1.33e-07 | 26 |
upper urinary tract | 1.33e-07 | 26 |
kidney rudiment | 1.33e-07 | 26 |
kidney field | 1.33e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.52e-11 | 2 |