FFCP PHASE1:Hg19::chr22:20105012..20105085,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9847 | |||
|TSSclassifier=strong | |||
|UniProt=P43487,C9JJ34,B7Z6U1,Q53EY3 | |||
|association_with_transcript=0bp_to_ENST00000331821,ENST00000411892,ENST00000447917,ENST00000488484,NM_002882,uc002zro.1,uc002zrp.2,uc011ahl.1_5end | |||
|cluster_id=chr22:20105012..20105085,+ | |||
|coexpression_cluster_id=C3964 | |||
|description=CAGE_peak_1_at_RANBP1_5end | |||
|id=chr22:20105012..20105085,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.25e-20!682;CL:0000548!9.08e-20!679;CL:0000004!9.08e-20!679;CL:0000255!9.08e-20!679;CL:0002321!2.07e-15!248;CL:0000220!8.38e-15!246;CL:0000066!1.18e-14!254;CL:0000144!4.22e-11!625;CL:0000003!9.72e-11!722;CL:0000055!2.00e-09!180;CL:0002371!8.61e-08!591;CL:0000221!1.90e-07!71;CL:0000063!9.69e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.52e-15,250;CL:0000066,7.89e-15,253;CL:0000221,2.11e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.78e-26!235;DOID:14566!1.24e-24!239;DOID:2531!6.15e-16!51;DOID:0060083!6.15e-16!51;DOID:1240!4.87e-13!39;DOID:0050686!1.15e-12!137;DOID:0050687!1.68e-11!143;DOID:8692!5.75e-10!31;DOID:305!5.99e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.12e-10;39!DOID:2531;2.90e-10;51!DOID:0060083;2.90e-10;51!DOID:8692;1.02e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.78e-26,235;DOID:14566,1.24e-24,239;DOID:2531,6.15e-16,51;DOID:0060083,6.15e-16,51;DOID:1240,4.87e-13,39;DOID:0050686,1.15e-12,137;DOID:0050687,1.68e-11,143;DOID:8692,5.75e-10,31;DOID:305,5.99e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,3.03e-07,148 | |||
|phase1_expression=25.4349730978779,37.681692204813,26.9222911823305,42.0307853083148,37.5447319318922,40.9999106327173,63.3249695420776,80.2284239252075,62.1621795115616,146.211692218398,174.450291993107,78.4204525947318,65.150443622428,29.085092945611,42.7502614689011,49.7520608374314,37.9697552655105,57.6944971406025,54.1605406657463,124.475389715633,159.324539861762,61.7505801311833,91.5955158819382,143.444397476383,147.512601523893,151.604197003935,182.26330857888,160.01901841071,19.6682138424452,14.5855171276941,32.511385896376,96.5392285702873,128.313721399535,82.8248982773604,165.082604436623,114.304062919887,106.283359039215,21.0518255242113,12.0326668482085,23.8711957787437,12.9870975059156,10.0407036465884,14.4242317875144,9.8870802370104,9.44689859222024,7.76268995801012,9.29716147622739,8.63452564845834,11.7688420940139,13.5215424391411,10.7587496742222,12.533558184095,10.6871161028352,16.1371170895957,13.5426486594342,7.9061782607894,6.27684145133045,10.1125568000288,11.6311879100943,10.9115869205872,10.2293940127847,6.26717470354761,12.1672831149195,5.96714650745772,7.54544020434318,15.3194010666608,14.3249117268982,11.5574386018102,12.5155900420848,12.3797641481916,13.3187890579341,11.7848843516021,7.59509729858123,23.8718473532494,23.8116815960849,37.1095802549825,19.4328531883437,20.7244112121279,17.0369121898905,26.2211724241949,23.2732512322935,27.2169589109305,31.6793240030381,30.5837622306794,19.5692035849982,26.0305435765569,28.8285110665929,29.3123744376786,24.4586602930399,41.978365199556,11.9534723512984,22.9022503854666,16.4377488093848,42.2948251452883,32.5094966529291,123.000367589961,18.2940086205865,17.2924735609632,16.6537214189602,28.0873312256339,26.0737813306872,32.6678985956966,17.534405556712,26.7385096524417,22.0954430606128,25.0333300879492,23.2891322837913,36.1217521626404,34.205608408248,38.6429075818639,26.8059517252273,24.0536561160094,19.1289666479058,20.0655621067285,17.7710390468461,36.1456803205236,30.6576394881537,30.5828426479541,25.5549888939698,24.5295369029554,18.8814201618361,19.9594929334159,32.0725003635656,26.621215120119,8.74515085866421,27.939715741194,21.3493279199472,17.338179917327,16.5812921385775,19.9857677358263,24.3806866313962,65.7286842509563,101.77859922745,68.6734389530676,33.5896400126046,60.5458449256243,56.465302240628,54.0164706035926,70.6175084215587,71.8403247778707,95.5642468341211,35.2988608466336,104.55274773996,132.740830516826,17.2010118636982,17.7612332045253,35.499775458537,20.7486843145648,30.8877251821269,28.2307701010469,92.4245194255179,120.432843314857,78.8008938649239,36.7450162250606,104.455359616267,105.370210063046,107.841402732994,34.1110122103514,25.9709371761298,30.459575761585,71.300789128319,54.7395916117329,76.1473619550289,93.7540854881965,65.6214977784225,88.7639299143753,105.304275761674,144.930975382036,151.783471091224,55.0574082549515,138.683720155318,2.63560834872127,7.75560528296651,88.963186637077,35.7819805220629,76.6114595570708,26.3494269818305,29.8310085578766,105.336509512912,58.8711480149422,45.9020681637731,61.9135546527071,39.8350125311701,69.2412854438197,129.9522129752,62.2079027620668,39.1799628646399,71.7023581411418,117.372188888201,91.8459632686563,101.176756733569,189.774149808324,177.898365860577,205.198628591985,56.9590137801152,142.364973764339,37.6105843479786,40.3920971475898,50.195186643547,60.0706498879097,36.6495252326282,128.272118832998,169.910949986127,72.5907982568559,111.500315703733,86.1230706195245,56.1890340310672,118.309767035902,41.4390058441271,44.2063794854435,44.7176311446675,58.217672640374,76.3619241656832,30.6592242654299,42.6207600999341,53.3333209882401,85.7445645418548,36.8553310396407,24.8534726334208,47.5239407047307,29.465796178879,95.9159975127135,110.044824409506,42.7106485490886,71.4594835947987,50.7644133838537,144.904762881959,125.373160832125,122.816997613081,132.686150419674,178.390841569069,133.216736062678,53.1928409921374,50.1727931790451,77.3555559573891,46.4367928031979,54.1409611252189,156.874816852833,129.64162667006,162.441434141467,151.764506479774,142.275276992341,154.225902422213,155.46049830867,126.366623540723,136.585240715969,93.7457427373303,110.791001304722,80.6685062209544,72.0342685789156,20.2808055714929,30.4676437170064,34.8566044942028,170.84621947347,84.8620225947484,96.9358128186669,42.4733604531381,68.5650694871479,174.41776713418,80.4593588427622,55.3874119027552,164.309696074173,76.4956112733948,87.4115253512079,53.8905906542421,68.1409633432268,73.1517109871045,64.876665911998,67.1673738265384,46.3582527531231,16.9889734200304,32.7605971194933,42.2112500899988,73.112390509686,53.7542810236351,81.804231108857,68.7809454357875,100.849976664345,177.506180453493,56.1636091201376,57.4075789766234,24.4647176338111,21.9062329193781,24.1123047844386,130.932658030453,33.2329930235702,19.926966025708,30.7930402840869,120.719476433702,70.2802755354767,46.3038820861537,139.491068925629,167.40866643198,109.714075588141,26.75924516186,10.7296933755565,150.463889954968,36.1675838555424,58.244164670365,141.206848469916,182.985380310029,159.320463051627,39.6049042433069,27.1310802695722,177.819912744646,161.890883593986,44.0686016440757,275.599251780833,26.8281045583032,39.2190056370132,40.7889804022793,27.9734695474738,31.642196760224,23.1917333431335,49.6023450867576,25.2696258835051,118.388631183796,68.9159019737677,52.6019385728982,72.6987510753976,99.9799484422263,16.156522336558,17.0345784139019,17.4546529340458,30.7454495309181,44.2475503115914,114.446744291099,68.3466362564143,123.122179069061,2.99602809578873,0,0.828831026872071,30.9182559132233,23.5080144898048,65.3748707116363,31.6115709526827,43.5366732665075,33.2752095721602,43.1080407173185,28.5898794741333,50.0296508923167,48.6323435074773,82.3639742183941,117.99626786669,72.8953525387215,45.4258685313558,55.2460912335478,9.9248652538986,14.6685656556659,21.5589666762958,50.0160492886328,43.2732142727292,95.555332692179,13.6459294300327,33.6081721500857,40.4150535983626,19.4771506868665,20.9799972117348,53.8860635831085,66.7881299002459,162.228597880394,119.143917685108,80.2382314254915,52.4446973475457,146.425076859549,129.803048861402,40.9033199418701,60.7734526976916,107.236694585743,106.705424451936,51.1385218341754,110.995104775223,64.0767604708731,121.574214222413,151.984793639391,53.6202274775809,126.244056318695,135.564683105383,138.618018137573,41.6413582263781,104.856271329471,79.2669842690668,132.02590943733,108.870957169663,161.189823399968,88.3617302883116,82.3521670728437,122.326709680518,76.0993978023317,27.0064067571372,29.675811354544,127.464695027134,91.5030354119321,82.6942374714488,74.1068680481634,36.9573038641567,40.5050309643991,173.612791488204,157.187762919557,208.546734169095,65.2040886350421,93.6807842685916,182.129302788208,45.3173061441893,40.8253740941616,60.7320612873735,38.2838137483752,62.5155085687299,75.3049789861603,20.7776148908222,71.7948388265418,62.2227831955699,53.7629090620192,49.5861805482791,47.8136485288114,72.5643175781896,54.7072802958711,55.366399325777,66.7205678733387,112.850925968298,35.9468749948493,44.5484547096312,63.5808398561376,52.3428851567446,71.1050907016382,120.99333720902,50.7478028749023,53.8935091988228,101.523287953594,122.883702250577,68.7272040760222,54.9380763135128,88.3154426809668,70.419905112949,50.8536524791093,31.9791899256752,52.4116790440563,53.491008000959,66.5591864406691,36.7301061146114,44.2344621778695,127.957104715197,180.566881223167,158.756366889885,95.3998188237406,70.2641971418063,82.3045668643787,43.6992805066165,43.466925870707,158.619786634069,95.1822439066353,68.7988105987411,105.907759534654,115.424443953002,29.4670096431319,59.8402468013009,55.5955869703164,66.5145230305014,54.6741692492564,15.2234282769651,10.7049208999933,14.8108268665282,10.0057345692271,8.63860773481008,5.83625980073446,14.5808488054291,15.8625035258854,188.9717818245,76.0359085658053,110.023056975483,187.47540370185,174.132940062569,129.335871207417,162.295945637941,159.863076517686,111.64763078717,49.1082711919408,111.994569394722,89.2935026400799,119.594971813393,186.762435761444,72.6839983561195,153.886226021657,83.1846229037164,131.371609381372,68.9870905058329,49.1212643000744,122.589064959075,98.6411635805554,122.967817441677,112.543542951575,120.54987329664,148.935752726732,144.423332306175,97.5900866233613,84.5922030527097,75.791918865329,19.7786042017057,63.107471309747,78.7904726841772,63.6464968846365,45.3614521001611,76.0229582931555,50.6815158463733,35.7893153195867,39.8094448441751,51.4246217205825,208.312097022624,120.341482632956,23.1127666371241,30.3912307084262,53.6616752929608,45.8163697609654,75.4509857476356,49.1442548505656,73.96165299425,48.1566959877389,58.8308225760903,23.3784871359533,23.948309234694,43.3434261564084,31.9879806211422,43.3227018415845,41.9188975802508,46.3561414731715,67.6940399970555,32.6249808945657,76.3554037995703,77.8016169895865,189.582920777885,159.96092518404,200.040764780912,71.880747902383,30.1152071176705,36.058335148997,24.4130778107333,29.524662401637,40.7855714155896,43.6576940336405,80.1787091499768,52.1444803601976,22.6233760001163,49.3369101817515,180.992664944627,93.5274654749826,114.731624749641,51.0401855571071,84.7277738967226,51.1713384977889,137.960952564244,228.406273054761,153.247170711944,236.649847987423,273.311172838929,311.812508601116,222.201621020021,73.1108263309742,88.6191871017714,35.0950537542168,154.357554005863,119.662917777376,42.7962630363757,21.5836457388148,24.441205797345,29.3555917393816,66.848090970058,100.140649575732,31.5437302349569,32.1031058919516,41.9333357848357,125.528894980378,51.8511240170038,54.6255853951709,18.5454669339214,33.8774004936259,37.6469496805503,25.7169379087946,66.5932748006202,170.878139422663,81.0877724702766,60.2405359693408,64.042315355074,126.640775559336,65.7448051328821,53.6670984560847,51.5472422855339,105.243834823042,137.466487190456,19.7441135113494,24.0780445460263,113.688689264675,102.909758457349,137.789736935285,24.732199204547,21.5344949127261,39.5466296365932,113.607755532156,195.932607139148,40.202355431983,60.8164800305237,27.1738400652699,26.6816243424191,20.5803897869594,46.253023906468,83.9553249896162,47.1886244120403,34.5731515171559,59.3927120002767,117.611323273781,39.4122197613481,33.3683079736343,107.404123171047,52.0111061822734,34.8243767451678,39.83946525757,19.1619882100458,15.0417904496985,124.608605928395,21.5047448979636,18.5619943449464,33.0221591305334,44.328738110776,16.7398158773263,19.192745340001,24.4547839851684,42.5153862580036,85.0420431550413,252.26374974773,277.411779311006,244.135635839858,46.6546262379909,248.346882948946,33.3996469719907,35.0042753706749,129.567037662805,133.688332372511,149.558521690507,25.1970758537681,28.6306723186441,28.7952898559037,107.674534719364,19.7802325320987,26.542021596309,26.1888834568128,35.6781805272361,116.300609575584,20.0114691384543,19.2006671405975,193.752625692919,41.2679697332822,31.1119736832456,48.0083419360831,50.2866804562447,77.5774321081253,56.56882323276,92.6892908634628,43.3794611687124,53.0027555648885,30.8986265704106,41.388804345462,35.4149754420562,36.6503811604669,19.7556713250235,13.5195702385713,21.5404308780542,30.762293352341,92.28463209634,161.496985453068,28.7253565996582,21.2166943314095,23.8155399321565,25.4266828713673,23.9347020418157,38.1641453888069,38.1009317385804,35.0215380268634,37.807661073363,30.9640965672638,34.6098640794979,28.9990201736261,80.2422082630139,188.09551398297,85.9850496461143,59.0913240438082,72.4618724670369,135.348787778189,132.892583236127,165.075811992883,101.197863163848,57.1450037347692,77.4658291575115,68.4264692767004,26.6943366478961,48.056414363354,77.5814638905416,127.769378879046,131.886793790753,118.198201235467,26.9881867298163,94.2446148238894,72.9882925799906,82.9426149420944,31.304703708704,63.4087109968262,33.510858670854,92.7665271706629,88.0147510540388,67.6686509367677,25.5218567933172,32.6438628732865,85.6059416379149,59.0640612914404,57.5841625789722,32.8080735394493,47.1918584497893,73.1245826588497,124.233282975441,58.263422856654,39.5903431093756,76.1131151015114,38.3250119914383,69.1715241640578,27.6297902469171,77.3898459242959,67.7128274330911,84.1333354452302,68.4164854629818,64.2500435620029,36.4631947412859,41.4775308455192,26.8907226198356,15.8109159972902,23.8805475613533,40.9512311058016,115.513267114248,152.567353064929,104.993382823838,104.771278559646,11.5384036372746,71.5070101494213,101.258272638512,71.6183079523556,88.9570481847151,86.9681724864831,147.719991613454,124.711891891726,149.617204323059,125.941537225887,61.009002069183,78.3274030116894,148.599548180883,56.2867700656551,71.5276027161368,92.8662068011145,69.124484963374,37.9744391917968,31.6007787474581,46.759870187443,44.378212817888,43.6897855832808,42.8521883576921,52.2137256104845,44.7287538400228,19.9877188362816,66.1515622696913,119.267390304566,84.1937267214507,86.1821469481523,31.6547139237749,65.5841929757096,53.3095475271616,30.0089210113536,121.829861496926,42.201756606587,61.2861665086528,40.615435542504,45.2439623824159,35.254619170802,42.9592954237616,27.0759703416551,41.9812663483663,37.1942870132389,18.6407640731442,23.3219253842968,37.8123175373184,170.30731604358,31.0707064809406,21.5221582220047,21.8507617525187,16.847002159996,25.6349849770026,89.0758723806174,65.3369315956564,32.1496836980414,46.5013509089343,179.30005662098,65.1816015087525,21.8995729052934,29.5377309042084,56.8952491526992,40.1789837024178,68.8809015987402,12.4215438850633,24.3020250200632,149.480876699159,220.509983923334,107.965987099902,34.4735886834009,58.0205259656503,30.0464519685352,28.3416461343778,9.46500189404611,27.4530241694912,21.3885645945486,15.6653208570644,40.3228088637528,33.8124960374109,57.332336338646,67.2251145104732,146.341998320327,71.931575739539,11.6537190693821,19.1979448821182,31.3149896461314,30.1140815696666,146.68004359074,54.1146108438922,35.2003468701603,73.414953325324,69.8122281333475,84.3882295537705,24.6957305945423,61.633796062116,32.9222107453066,36.5270999413319,34.1730993297358,32.7835140081959,22.8725728251856,48.605408672091,82.9244319676547,29.2289984917345,29.7150863558191,123.327386411362,50.8878725026124,28.9373794806867,28.8066506414114,41.6291741300515,14.6793370689453,37.5549707856802,93.4007648183653,35.1516004287029,46.25317317608,18.515939418039,68.0750883245155,46.6797384917732,56.2414530760926,187.735640154597,147.399256579025,174.083740389714,92.4018797462355,65.7354816953279,51.0935641413738,47.1330173869665,46.9070141970902,50.3772564693616,29.0209303810573,35.1672185930444,26.2277797738207,39.5186956229809,40.8847799261919,28.6785180046864,80.7349410580417,21.8946224476887,30.9239299106076,28.303177226605,45.5170290443424,33.47397034825,29.8364374433534,28.9414510195032,138.62976644449,47.280214223828,119.704815017903,57.4881293482156,18.7712753922763,21.6367356203674,44.3516834364155,11.9836219353392,23.5490338501501,75.9747326758662 | |||
|short_description=p1@RANBP1 | |||
}} |
Latest revision as of 04:33, 19 September 2015
Short description: | p1@RANBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RANBP1_5end |
Coexpression cluster: | C3964_chronic_Mesenchymal_hepatocellular_hereditary_acute_rhabdomyosarcoma_Skeletal |
Association with transcript: | 0bp_to_ENST00000331821, ENST00000411892, ENST00000447917, ENST00000488484, NM_002882, uc002zro.1, uc002zrp.2, uc011ahl.1_5end |
EntrezGene: | RANBP1 |
HGNC: | 9847 |
UniProt: | P43487C9JJ34B7Z6U1Q53EY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.52e-15 | 250 |
epithelial cell | 7.89e-15 | 253 |
ectodermal cell | 2.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 3.03e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.78e-26 | 235 |
disease of cellular proliferation | 1.24e-24 | 239 |
hematologic cancer | 6.15e-16 | 51 |
immune system cancer | 6.15e-16 | 51 |
leukemia | 4.87e-13 | 39 |
organ system cancer | 1.15e-12 | 137 |
cell type cancer | 1.68e-11 | 143 |
myeloid leukemia | 5.75e-10 | 31 |
carcinoma | 5.99e-08 | 106 |