FFCP PHASE1:Hg19::chr5:92922801..92922812,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7025 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7975 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000512697_5end | |||
|cluster_id=chr5:92922801..92922812,+ | |||
|description=CAGE_peak_20_at_NR2F1_5end | |||
|id=chr5:92922801..92922812,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;8.78e-18;2!CL:0000064;6.58e-12;3!CL:0000067;6.58e-12;3!CL:0005012;6.58e-12;3!CL:0002304;6.58e-12;3!CL:0002581;1.48e-09;1!CL:0002599;1.48e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,1.34e-17,2;CL:0000064,9.18e-12,3;CL:0000067,9.18e-12,3;CL:0005012,9.18e-12,3;CL:0002304,9.18e-12,3;CL:0002581,1.06e-09,1;CL:0002599,1.15e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.75e-25!86;UBERON:0007284!2.75e-25!86;UBERON:0002346!1.43e-23!90;UBERON:0005743!1.44e-21!86;UBERON:0003056!6.59e-21!61;UBERON:0001017!1.36e-20!82;UBERON:0000073!1.44e-20!94;UBERON:0001016!1.44e-20!94;UBERON:0002616!1.88e-18!59;UBERON:0000956!2.63e-18!25;UBERON:0000203!2.63e-18!25;UBERON:0001869!7.54e-18!32;UBERON:0002619!2.80e-17!22;UBERON:0001049!1.15e-16!57;UBERON:0005068!1.15e-16!57;UBERON:0006241!1.15e-16!57;UBERON:0007135!1.15e-16!57;UBERON:0000955!1.43e-16!69;UBERON:0006238!1.43e-16!69;UBERON:0002020!1.64e-16!34;UBERON:0003528!1.64e-16!34;UBERON:0001893!1.87e-16!34;UBERON:0002791!1.31e-15!33;UBERON:0000033!1.96e-15!123;UBERON:0002780!2.39e-15!41;UBERON:0001890!2.39e-15!41;UBERON:0006240!2.39e-15!41;UBERON:0000119!6.28e-15!312;UBERON:0001950!6.34e-15!20;UBERON:0003080!7.89e-15!42;UBERON:0004121!1.12e-14!169;UBERON:0002200!3.83e-14!11;UBERON:0006876!3.83e-14!11;UBERON:0000153!3.95e-14!129;UBERON:0007811!3.95e-14!129;UBERON:0000924!5.38e-14!173;UBERON:0006601!5.38e-14!173;UBERON:0000483!3.55e-13!309;UBERON:0002203!1.45e-10!6;UBERON:0001768!1.45e-10!6;UBERON:0000481!8.67e-10!347;UBERON:0000475!1.37e-09!365;UBERON:0001871!3.82e-09!7;UBERON:0000477!1.55e-08!286;UBERON:0000064!4.02e-08!219;UBERON:0000488!7.06e-08!4;UBERON:0000349!8.98e-08!5;UBERON:0001456!9.68e-08!21;UBERON:0000019!2.93e-07!19;UBERON:0000047!2.93e-07!19;UBERON:0004088!2.93e-07!19;UBERON:0003072!2.93e-07!19;UBERON:0003071!2.93e-07!19;UBERON:0004128!2.93e-07!19;UBERON:0007625!2.99e-07!11;UBERON:0001801!5.04e-07!14;UBERON:0000025!6.52e-07!194;UBERON:0007023!7.70e-07!115;UBERON:0000970!8.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;6.58e-12;3!UBERON:0001775;6.58e-12;3!UBERON:0000488;3.73e-09;4!UBERON:0002367;2.28e-07;11!UBERON:0007625;2.28e-07;11!UBERON:0010147;2.28e-07;11!UBERON:0003937;8.61e-07;12!UBERON:0005399;8.61e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,9.18e-12,3;UBERON:0001775,9.18e-12,3;UBERON:0000488,4.78e-09,4;UBERON:0007625,2.44e-07,11;UBERON:0002367,2.72e-07,11;UBERON:0010147,2.72e-07,11;UBERON:0009846,2.72e-07,11;UBERON:0003353,2.72e-07,11;UBERON:0004902,2.72e-07,11;UBERON:0003820,2.72e-07,11;UBERON:0009847,2.72e-07,11;UBERON:0003064,3.55e-07,28 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.738726348460727,0.612002073732759,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,1.22895262313288,0.443458794925128,1.14185221401064,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0.375355559615893,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,2.88662684050547,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12131084345361,0.43596006883328,0.95339771567235,0,0,0,0,0,0.257207374262142,0,0,1.42977993658148,0.542621605391443,0.823240336780769,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,1.18011973463482,0,0,0,0,0,0,0,0,0,1.08378575017541,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0.54907405947211,0.942499218765491,0,0,0,1.46290121726877,0,0,2.45699840534374,1.1312434556297,0,0,0,0,0,1.9676842561399,0,0,0,0,0.294747123039363,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,3.95249063171651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45632626099416,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0.063186579628488,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0,0,0,0,0,0,0.882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,1.60351234632282,0,0,0,0,0,0,2.65195365854437,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.681909645754975,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.179088841081487,0,0.657852148736121,0.530067437837643,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.345786262321089,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,1.56215619722769,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0.214429632529969,0,3.25475991030751,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,2.49732190632894,0,0,0,0,0,0,0,0,0,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,2.20880187070458,0.135982980381829,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p20@NR2F1 | |||
}} |
Latest revision as of 06:09, 19 September 2015
Short description: | p20@NR2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NR2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000512697_5end |
EntrezGene: | NR2F1 |
HGNC: | 7975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 1.34e-17 | 2 |
ciliated cell | 9.18e-12 | 3 |
ciliated epithelial cell | 9.18e-12 | 3 |
multi-ciliated epithelial cell | 9.18e-12 | 3 |
non-pigmented ciliary epithelial cell | 9.18e-12 | 3 |
perirenal preadipocyte | 1.06e-09 | 1 |
smooth muscle cell of the esophagus | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 9.18e-12 | 3 |
ciliary body | 9.18e-12 | 3 |
atypical epithelium | 4.78e-09 | 4 |
pigment epithelium of eye | 2.44e-07 | 11 |
prostate gland | 2.72e-07 | 11 |
male accessory sex gland | 2.72e-07 | 11 |
embryonic cloacal epithelium | 2.72e-07 | 11 |
epithelium of hindgut | 2.72e-07 | 11 |
urogenital sinus epithelium | 2.72e-07 | 11 |
prostate bud | 2.72e-07 | 11 |
prostate field | 2.72e-07 | 11 |
intermediate mesoderm | 3.55e-07 | 28 |