FFCP PHASE1:Hg19::chr2:196545118..196545142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000465851_5end | |association_with_transcript=-58bp_to_ENST00000465851_5end | ||
|cluster_id=chr2:196545118..196545142,+ | |||
|description=CAGE_peak_10_at_SLC39A10_5end | |description=CAGE_peak_10_at_SLC39A10_5end | ||
|id=chr2:196545118..196545142,+ | |id=chr2:196545118..196545142,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.58e-07;6!CL:0000404;4.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-07,6;CL:0000031,4.26e-07,6;CL:0000404,4.26e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.58e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.29e-11;20!UBERON:0007029;2.28e-10;1!UBERON:0002619;5.79e-10;22!UBERON:0000956;8.55e-09;25!UBERON:0000203;8.55e-09;25!UBERON:0001872;2.58e-08;5!UBERON:0002021;2.58e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.94e-11,20;UBERON:0007029,1.57e-10,1;UBERON:0002619,7.15e-10,22;UBERON:0000956,1.03e-08,25;UBERON:0000203,1.03e-08,25;UBERON:0001872,2.94e-08,5;UBERON:0002021,3.40e-08,5;UBERON:0002780,1.91e-07,41;UBERON:0001890,1.91e-07,41;UBERON:0003080,1.91e-07,41;UBERON:0006240,1.91e-07,41;UBERON:0002791,7.95e-07,32;UBERON:0001869,7.95e-07,32 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.334231370655521,0.589211814949674,0,0.541607727530031,0.384273959177026,0.260118695119756,0.822189523018381,0.552700035571697,0.579606171470105,0.14828656316206,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,1.24930726552346,0,0,0,0.802320587350522,0.289648807765598,0,0,0.12786256184353,1.0843174571537,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,0.446498641420399,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.352303495931295,0,0,0.61246251376468,0.368502951935304,0.206651562351531,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.206105058476878,0.772921620136887,0,0.337552664482532,0.292311015483596,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.57978255948989,0.272746120590835,0,0.731842236777572,0.795178609928912,0.464775771478074,0.414644220061482,0.504641701751257,1.82488679537915,0,0,0,0.464367928031979,0,0.709840800239063,0.842923450390509,0.482022059766964,0.772057809126758,0.217879444092406,0.71181185733329,1.21348177344148,0.784885860501384,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.100528972411631,0.648119116109707,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,1.32072651019839,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.2933531432838,0.258543431515556,0,0,0,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0.602878754119172,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0,0,0,0.646882724578552,0.128343036279748,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.306923946576125,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,0.802025881213139,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0.616122696835318,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,1.5740617341532,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0,0,0,0,0,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.144269212976445,0.284567373393656,0,0,0,0.423347165447766,0.649243880549111,0.280797178113459,0,0.156679895773023,0,0,0,0.201799707191048,0.851692475380653,1.03051603426729,0,0,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0.703347082052564,0.111308705022906,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0.1137934482855,0,0.709163045303809,0.344743373241465,0.583209226766509,0.173624994933292,0,0.241192877250816,0,0,0,0.658156191461918,0.21787692703798,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.269272933229316,0.54323685961004,0,0.183195186803725,2.13213910407454,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.632994193584081,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0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| ||
|short_description=p10@SLC39A10 | |short_description=p10@SLC39A10 | ||
}} | }} |
Latest revision as of 06:16, 19 September 2015
Short description: | p10@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC39A10_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENST00000465851_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.26e-07 | 6 |
neuroblast | 4.26e-07 | 6 |
electrically signaling cell | 4.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neocortex | 7.94e-11 | 20 |
surface | 1.57e-10 | 1 |
regional part of cerebral cortex | 7.15e-10 | 22 |
cerebral cortex | 1.03e-08 | 25 |
pallium | 1.03e-08 | 25 |
parietal lobe | 2.94e-08 | 5 |
occipital lobe | 3.40e-08 | 5 |
regional part of forebrain | 1.91e-07 | 41 |
forebrain | 1.91e-07 | 41 |
anterior neural tube | 1.91e-07 | 41 |
future forebrain | 1.91e-07 | 41 |
regional part of telencephalon | 7.95e-07 | 32 |
cerebral hemisphere | 7.95e-07 | 32 |