FFCP PHASE1:Hg19::chr12:5541253..5541258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4908 | |EntrezGene=4908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8023 | |HGNC=8023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000535299_5end | |association_with_transcript=-19bp_to_ENST00000535299_5end | ||
|cluster_id=chr12:5541253..5541258,+ | |||
|description=CAGE_peak_2_at_NTF3_5end | |description=CAGE_peak_2_at_NTF3_5end | ||
|id=chr12:5541253..5541258,+ | |id=chr12:5541253..5541258,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.30e-10!23;CL:0000055!2.61e-08!180 | |ontology_enrichment_celltype=CL:0002620!1.30e-10!23;CL:0000055!2.61e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.06e-14;23 | |ontology_enrichment_celltype_v019=CL:0002620;1.06e-14;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.99e-15,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.48e-10;5!DOID:450;1.48e-10;5!DOID:66;1.48e-10;5!DOID:423;1.48e-10;5!DOID:0080000;1.48e-10;5!DOID:11722;1.48e-10;5 | |ontology_enrichment_disease_v019=DOID:17;1.48e-10;5!DOID:450;1.48e-10;5!DOID:66;1.48e-10;5!DOID:423;1.48e-10;5!DOID:0080000;1.48e-10;5!DOID:11722;1.48e-10;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.45e-10,5;DOID:450,1.45e-10,5;DOID:66,1.45e-10,5;DOID:423,1.45e-10,5;DOID:0080000,1.45e-10,5;DOID:11722,1.45e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.29e-07!365;UBERON:0002097!6.40e-07!40;UBERON:0002199!9.51e-07!45;UBERON:0002416!9.51e-07!45 | |ontology_enrichment_uberon=UBERON:0000475!3.29e-07!365;UBERON:0002097!6.40e-07!40;UBERON:0002199!9.51e-07!45;UBERON:0002416!9.51e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.69e-11;41!UBERON:0002199;7.02e-09;46!UBERON:0002416;7.02e-09;46!UBERON:0001905;2.43e-08;2!UBERON:0002757;2.43e-08;2!UBERON:0010134;2.43e-08;2!UBERON:0005408;2.43e-08;2!UBERON:0001899;2.43e-08;2!UBERON:0003102;1.00e-07;50!UBERON:0004909;3.14e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002097;4.69e-11;41!UBERON:0002199;7.02e-09;46!UBERON:0002416;7.02e-09;46!UBERON:0001905;2.43e-08;2!UBERON:0002757;2.43e-08;2!UBERON:0010134;2.43e-08;2!UBERON:0005408;2.43e-08;2!UBERON:0001899;2.43e-08;2!UBERON:0003102;1.00e-07;50!UBERON:0004909;3.14e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.04e-14,41;UBERON:0002199,6.42e-14,46;UBERON:0002416,6.42e-14,46;UBERON:0001905,2.46e-08,2;UBERON:0002757,2.46e-08,2;UBERON:0010134,2.46e-08,2;UBERON:0005408,2.46e-08,2;UBERON:0001899,2.46e-08,2;UBERON:0004909,4.35e-07,2 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.662045904066094,0,0,0,0,0.49333509683432,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0.245668634623536,0,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0,0,0.30648779579902,0.45071417671979,0.226864366320042,1.61450672119976,2.34913127700424,0.635795703478686,1.80054657650641,1.03052529238439,1.8034837803194,1.11670113798954,0.506328996723799,0.584622030967192,1.51460264546469,3.40584624976508,0.484938170456436,2.84007674013291,1.71278566986988,1.52604533079439,0,0,0,0.243947412259191,0.530119073285941,0.464775771478074,0.310983165046111,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.368965315629341,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,1.90994212779139,0,0,0,0,0.285826432630578,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.902838299183157,2.27407504055985,0,0,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,1.07946785661859,0.177561725313127,0.246381468041427,0,0,0.483437798366489,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.915694648183434,0.742585499285292,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,1.79128453917934,0,0,0,0.539617372749944,0,0,0.202182481573316,3.17020642346017,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,1.239293992399,0.281695602532241,0.573645408816206,0.687743287091848,1.426684205925,0,0.422215270595328,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0.422250816255987,4.38345574152353,0.276283915531148,0,0,0,4.66559381492711,0,0,0,0.591860433821602,0,2.22273980289274,0,0,0,0,0,0,0.227586896570999,0,0.709163045303809,0,0,0,0,0,0,1.87984741883082,1.47773809476774,0,0,0.975966209950223,0.846452843541768,0,0.23056390438806,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,1.63232808159148,0.424059214301822,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,1.20990716048664,0.61214552326098,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0.0801588202515337,0.640358984218058,0.39961921916426,0,0,0,0,0,0,1.08723364858891,0.627617077873999,1.01998217636322,0,0,0,0,0.859530882839914,0,0.837847203816763,0.916641696046735,0,0,0,0.223171457441873,0.604651252380536,1.80149941771202,1.16495949527454,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.367182116944987,0,0,1.15149118391667,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0,0.110929051536852,0.124192805882767,1.52183498429854,0,0,0,0,0,1.1593682288866,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,1.32920857278997,0.521745061811734,0.150257608997218,1.90402606084398,0.813741466409323,0.545545977607678,0,0,0.796191777397232,0.400027764663154,0.343395705182793,0,1.26184898228651,0,0,0,0,0.231522474323834,0,0,0,0,2.8270263351341,0,0,0,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.76337971845342,1.2249819094128,0,0,0,0,1.26035848110859,0,0.161475645631851,0,0,0,0,0.462102664601353,0,0,1.19349733269765,0.82731361184183,1.81534561833168,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0,8.0355275381743,5.71682327772001,0,0,0.177404740325278,0,0.171488009437418,0,0.0657727735628491,0,0,0.39246546425257,0,0,1.82631744101899,0,0,0.500335809236594,1.10609528212909,0,2.26015753993353,0,0,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,1.11855431797792,0,0,0.647428837187895,0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| ||
|short_description=p2@NTF3 | |short_description=p2@NTF3 | ||
}} | }} |
Latest revision as of 07:24, 19 September 2015
Short description: | p2@NTF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NTF3_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000535299_5end |
EntrezGene: | NTF3 |
HGNC: | 8023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.99e-15 | 23 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.04e-14 | 41 |
integument | 6.42e-14 | 46 |
integumental system | 6.42e-14 | 46 |
pineal body | 2.46e-08 | 2 |
regional part of epithalamus | 2.46e-08 | 2 |
secretory circumventricular organ | 2.46e-08 | 2 |
circumventricular organ | 2.46e-08 | 2 |
epithalamus | 2.46e-08 | 2 |
epithelium of gonad | 4.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.45e-10 | 5 |
myotonic disease | 1.45e-10 | 5 |
muscle tissue disease | 1.45e-10 | 5 |
myopathy | 1.45e-10 | 5 |
muscular disease | 1.45e-10 | 5 |
myotonic dystrophy | 1.45e-10 | 5 |